RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 MATR3P43243 847 aaKnown RBP eCLIP13.67□□□□□ -0.22
LRRC28-206ENST00000558471 SCNN1GP51170 649 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 RNASELQ05823 741 aaKnown RBP13.67□□□□□ -0.22
LRRC28-206ENST00000558471 FAM160A1Q05DH4 1040 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 MCL1Q07820 350 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 KMT5BQ4FZB7 885 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 SEZ6Q53EL9 994 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 FAM26FQ5R3K3 315 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 L1TD1Q5T7N2 865 aaKnown RBP13.67□□□□□ -0.22
LRRC28-206ENST00000558471 KCNT2Q6UVM3 1135 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 KLHL23Q8NBE8 558 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 COLGALT1Q8NBJ5 622 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 P2RX5Q93086 422 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 ACCSQ96QU6 501 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 GAS2L1Q99501 681 aaPredicted RBP13.67□□□□□ -0.22
LRRC28-206ENST00000558471 GBP3Q9H0R5 595 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 AAASQ9NRG9 546 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 PCDHB12Q9Y5F1 795 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 PRRC2BQ5JSZ5 2229 aaKnown RBP13.67□□□□□ -0.22
LRRC28-206ENST00000558471 MYO7AQ13402 2215 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 A0A0B4J269 797 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 GRM6O15303 877 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 ZC3H11AO75152 810 aaKnown RBP eCLIP13.66□□□□□ -0.22
LRRC28-206ENST00000558471 PRPF40AO75400 957 aaKnown RBP13.66□□□□□ -0.22
LRRC28-206ENST00000558471 NR1I2O75469 434 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 RPN1P04843 607 aaKnown RBP13.66□□□□□ -0.22
LRRC28-206ENST00000558471 ITGB1P05556 798 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 FOSL2P15408 326 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 POU3F3P20264 500 aaPredicted RBP13.66□□□□□ -0.22
LRRC28-206ENST00000558471 HOXD13P35453 343 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 BCAR1P56945 870 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 DPYDQ12882 1025 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 ALCAMQ13740 583 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 NOLC1Q14978 699 aaKnown RBP eCLIP13.66□□□□□ -0.22
LRRC28-206ENST00000558471 KANK3Q6NY19 840 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 CLEC17AQ6ZS10 378 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 EPM2AIP1Q7L775 607 aaPredicted RBP13.66□□□□□ -0.22
LRRC28-206ENST00000558471 ZNF507Q8TCN5 953 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 ZNF558Q96NG5 402 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 ACAP3Q96P50 834 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 FAM193BQ96PV7 902 aaPredicted RBP13.66□□□□□ -0.22
LRRC28-206ENST00000558471 C11orf84Q9BUA3 381 aaPredicted RBP13.66□□□□□ -0.22
LRRC28-206ENST00000558471 CCDC94Q9BW85 323 aaPredicted RBP13.66□□□□□ -0.22
LRRC28-206ENST00000558471 ALG13Q9NP73 1137 aaKnown RBP13.66□□□□□ -0.22
LRRC28-206ENST00000558471 SLC39A2Q9NP94 309 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 EXOC7Q9UPT5 735 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 STYXL1Q9Y6J8 313 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 ZMYM2Q9UBW7 1377 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 ATG2AQ2TAZ0 1938 aa13.66□□□□□ -0.22
LRRC28-206ENST00000558471 NT5C1B-RDH14C9J2C7 533 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 PTGESO14684 152 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 MEFVO15553 781 aaPredicted RBP13.65□□□□□ -0.22
LRRC28-206ENST00000558471 FGF18O76093 207 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 GALTP07902 379 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 ADSSP30520 456 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 ALDH7A1P49419 539 aaKnown RBP13.65□□□□□ -0.22
LRRC28-206ENST00000558471 STK4Q13043 487 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 POSTNQ15063 836 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 SLFN12LQ6IEE8 588 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 ALKAL1Q6UXT8 129 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 STXBP4Q6ZWJ1 553 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 COLGALT2Q8IYK4 626 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 SYCP3Q8IZU3 236 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 SLC39A11Q8N1S5 342 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 SPPL3Q8TCT6 385 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 TIGD1Q96MW7 591 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 RPS6KC1Q96S38 1066 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 TMEM206Q9H813 350 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 SPG21Q9NZD8 308 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 STXBP5LQ9Y2K9 1186 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 MTCH2Q9Y6C9 303 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 TRANK1O15050 2925 aa13.65□□□□□ -0.22
LRRC28-206ENST00000558471 PDCD11Q14690 1871 aaKnown RBP13.65□□□□□ -0.22
LRRC28-206ENST00000558471 ANK1P16157 1881 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 OGTO15294 1046 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 EIF3DO15371 548 aaKnown RBP eCLIP13.64□□□□□ -0.23
LRRC28-206ENST00000558471 FAM189A1O60320 539 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 ALDH2P05091 517 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 DNAJB1P25685 340 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 TNFSF9P41273 254 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 SLC11A1P49279 550 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 YARSP54577 528 aaKnown RBP13.64□□□□□ -0.23
LRRC28-206ENST00000558471 UBE2HP62256 183 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 DSC1Q08554 894 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 GRIK3Q13003 919 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 PSMD2Q13200 908 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 PNOCQ13519 176 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 CAMK1Q14012 370 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 SLC10A6Q3KNW5 377 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 XKR4Q5GH76 650 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 ZBTB41Q5SVQ8 909 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 TMEM173Q86WV6 379 aaPredicted RBP13.64□□□□□ -0.23
LRRC28-206ENST00000558471 SCFD1Q8WVM8 642 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 TMEM175Q9BSA9 504 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 MSTO1Q9BUK6 570 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 EXOC1Q9NV70 894 aa13.64□□□□□ -0.23
LRRC28-206ENST00000558471 LMCD1Q9NZU5 365 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms