RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
HERC1-202ENST00000558324 ZMYM2Q9UBW7 1377 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 SLC16A4O15374 487 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 TEX28O15482 410 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 LILRB3O75022 631 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 TADA2AO75478 443 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 ADH1AP07327 375 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 HARSP12081 509 aaKnown RBP13.11□□□□□ -0.31
HERC1-202ENST00000558324 MTHFRP42898 656 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 OSTNP61366 133 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
HERC1-202ENST00000558324 TUSC3Q13454 348 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 HSP90AA2PQ14568 343 aaPredicted RBP13.11□□□□□ -0.31
HERC1-202ENST00000558324 ZNF568Q3ZCX4 644 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 ARL6IP4Q66PJ3 421 aaKnown RBP13.11□□□□□ -0.31
HERC1-202ENST00000558324 ZBTB33Q86T24 672 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 RNF168Q8IYW5 571 aaPredicted RBP13.11□□□□□ -0.31
HERC1-202ENST00000558324 CEP120Q8N960 986 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 RASSF8Q8NHQ8 419 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 NECTIN4Q96NY8 510 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 NT5C3AQ9H0P0 336 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 SFXN1Q9H9B4 322 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 MAN1C1Q9NR34 630 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 SSX2IPQ9Y2D8 614 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 NR2E1Q9Y466 385 aa13.11□□□□□ -0.31
HERC1-202ENST00000558324 NPHP3-ACAD11A0A0J9YXS1 232 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 C2CD4DB7Z1M9 353 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 KIF4AO95239 1232 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 EFEMP2O95967 443 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 GLUD1P00367 558 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 THP07101 528 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 PLA2G4BP0C869 781 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 SPATA31D3P0C874 917 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 RPL17P18621 184 aaKnown RBP13.1□□□□□ -0.31
HERC1-202ENST00000558324 DSG1Q02413 1049 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 GRIN1Q05586 938 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 CUL4AQ13619 759 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 DHX8Q14562 1220 aaKnown RBP13.1□□□□□ -0.31
HERC1-202ENST00000558324 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 ATAT1Q5SQI0 421 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 HYIQ5T013 277 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 KIAA0319Q5VV43 1072 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 SPATA31D4Q6ZUB0 917 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 HFE2Q6ZVN8 426 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 TAS1R3Q7RTX0 852 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 BRAPQ7Z569 592 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 APBB1IPQ7Z5R6 666 aaPredicted RBP13.1□□□□□ -0.31
HERC1-202ENST00000558324 PALB2Q86YC2 1186 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 RIN2Q8WYP3 895 aaPredicted RBP13.1□□□□□ -0.31
HERC1-202ENST00000558324 EDAQ92838 391 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 TARS2Q9BW92 718 aaKnown RBP13.1□□□□□ -0.31
HERC1-202ENST00000558324 MRPL4Q9BYD3 311 aaKnown RBP13.1□□□□□ -0.31
HERC1-202ENST00000558324 CDT1Q9H211 546 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 ARHGAP28Q9P2N2 729 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 TNFSF13BQ9Y275 285 aa13.1□□□□□ -0.31
HERC1-202ENST00000558324 SF3B1O75533 1304 aaKnown RBP eCLIP13.1□□□□□ -0.31
HERC1-202ENST00000558324 GUCY2CP25092 1073 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 UBA7P41226 1012 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 SLC12A3P55017 1021 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 ZXDAP98168 799 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 SF3A1Q15459 793 aaKnown RBP13.09□□□□□ -0.31
HERC1-202ENST00000558324 USP41Q3LFD5 358 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 PRSS55Q6UWB4 352 aaPredicted RBP13.09□□□□□ -0.31
HERC1-202ENST00000558324 CEP57Q86XR8 500 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 SYT2Q8N9I0 419 aaPredicted RBP13.09□□□□□ -0.31
HERC1-202ENST00000558324 TDRD5Q8NAT2 981 aaKnown RBP13.09□□□□□ -0.31
HERC1-202ENST00000558324 AK8Q96MA6 479 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 ACO2Q99798 780 aaKnown RBP13.09□□□□□ -0.31
HERC1-202ENST00000558324 TCHPQ9BT92 498 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 BACH2Q9BYV9 841 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 TMEM134Q9H6X4 195 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 CHST7Q9NS84 486 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 ANKFY1Q9P2R3 1169 aa13.09□□□□□ -0.31
HERC1-202ENST00000558324 PLS3P13797 630 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 YARSP54577 528 aaKnown RBP13.08□□□□□ -0.32
HERC1-202ENST00000558324 STRN3Q13033 797 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 NAB2Q15742 525 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 PTPN21Q16825 1174 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 RTP2Q5QGT7 225 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 FAM171A1Q5VUB5 890 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 FAM173BQ6P4H8 233 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 TRIM67Q6ZTA4 783 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 GPR149Q86SP6 731 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 LRRC15Q8TF66 581 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 CALML4Q96GE6 196 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 TIPINQ9BVW5 301 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 CCDC94Q9BW85 323 aaPredicted RBP13.08□□□□□ -0.32
HERC1-202ENST00000558324 C17orf75Q9HAS0 396 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 GOLGA2P5Q9HBQ8 144 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 RXFP1Q9HBX9 757 aa13.08□□□□□ -0.32
HERC1-202ENST00000558324 RBM19Q9Y4C8 960 aaKnown RBP13.08□□□□□ -0.32
HERC1-202ENST00000558324 TMEM221A6NGB7 291 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 M0R296 226 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 TGM5O43548 720 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 RFPL2O75678 378 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 BMP15O95972 392 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 ASGR2P07307 311 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 PLCG1P19174 1290 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 PDCP20941 246 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms