RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 AFF1P51825 1210 aaKnown RBP5.79□□□□□ -1.48
SPG11-208ENST00000558155 PSMC5P62195 406 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 AKAP17AQ02040 695 aaKnown RBP5.79□□□□□ -1.48
SPG11-208ENST00000558155 DSC1Q08554 894 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 FUT2Q10981 343 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 PCBP1Q15365 356 aaKnown RBP eCLIP5.79□□□□□ -1.48
SPG11-208ENST00000558155 CSRP2Q16527 193 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 UGCGQ16739 394 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 PFKFB3Q16875 520 aaPredicted RBP5.79□□□□□ -1.48
SPG11-208ENST00000558155 UVSSAQ2YD98 709 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 UBXN11Q5T124 520 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 LIN9Q5TKA1 542 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 LRCH2Q5VUJ6 765 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 IL31Q6EBC2 164 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 FUT10Q6P4F1 479 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 APOA5Q6Q788 366 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 TSSK4Q6SA08 328 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 Q6ZNB5 142 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 PRR23BQ6ZRT6 265 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 TPRG1Q6ZUI0 275 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 RTL10Q7L3V2 364 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 TCP11Q8WWU5 503 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 PSPC1Q8WXF1 523 aaKnown RBP5.79□□□□□ -1.48
SPG11-208ENST00000558155 SLC7A3Q8WY07 619 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 SLC5A5Q92911 643 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 FGF13Q92913 245 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 ZDHHC16Q969W1 377 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 CCDC51Q96ER9 411 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 MBOAT7Q96N66 472 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 CEP89Q96ST8 783 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 GAD1Q99259 594 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 IER2Q9BTL4 223 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 GPR62Q9BZJ7 368 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 UNC45AQ9H3U1 944 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 PARD6AQ9NPB6 346 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 MIOSQ9NXC5 875 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 ADAM28Q9UKQ2 775 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 ANGPTL2Q9UKU9 493 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 KCNH3Q9ULD8 1083 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 POLIQ9UNA4 740 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 GIT1Q9Y2X7 761 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 COL4A3BPQ9Y5P4 624 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 MYO15AQ9UKN7 3530 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 ZNF292O60281 2723 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 TDRD15B5MCY1 1934 aaKnown RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 GPR179Q6PRD1 2367 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 ARL5CA6NH57 179 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 GOLGA8AA7E2F4 631 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 GOLGA8BA8MQT2 603 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 PRPF3O43395 683 aaKnown RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 ECI2O75521 394 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 PSMD10O75832 226 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 ERLIN2O94905 339 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 STBD1O95210 358 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 C8AP07357 584 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 GSPT1P15170 499 aaKnown RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 RPL17P18621 184 aaKnown RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 TARSP26639 723 aaKnown RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 HOXA9P31269 272 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 HOXA11P31270 313 aaPredicted RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 CNR2P34972 360 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 CXCL12P48061 93 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 CCR3P51677 355 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 RCAN1P53805 252 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 NTHL1P78549 312 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 LAMTOR4Q0VGL1 99 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 MTAPQ13126 283 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 FZD5Q13467 585 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 SIM2Q14190 667 aaPredicted RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 NECTIN1Q15223 517 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 LPAL2Q16609 132 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 RNF20Q5VTR2 975 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 CREB3L3Q68CJ9 461 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 NOTUMQ6P988 496 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 PDXDC1Q6P996 788 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 DHX32Q7L7V1 743 aaKnown RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 OTUD6AQ7L8S5 288 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 CEP57Q86XR8 500 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 SMG8Q8ND04 991 aaKnown RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 ITFG1Q8TB96 612 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 PRPF31Q8WWY3 499 aaKnown RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 LENG9Q96B70 501 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 KXD1Q9BQD3 176 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 CLSTN3Q9BQT9 956 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 SH2D3AQ9BRG2 576 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 TTPALQ9BTX7 342 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 C22orf23Q9BZE7 217 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 TRIM6Q9C030 488 aaPredicted RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 CSRNP2Q9H175 543 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 LMAN1LQ9HAT1 526 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 PRMT8Q9NR22 394 aaPredicted RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 SH2B1Q9NRF2 756 aaPredicted RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 SEMA4GQ9NTN9 838 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 GDE1Q9NZC3 331 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 FBXW11Q9UKB1 542 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 BRPF3Q9ULD4 1205 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 NAP1L2Q9ULW6 460 aaPredicted RBP5.78□□□□□ -1.48
SPG11-208ENST00000558155 PPME1Q9Y570 386 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 IPPQ9Y573 584 aa5.78□□□□□ -1.48
SPG11-208ENST00000558155 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms