RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 FAM83GA6ND36 823 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 CCNT1O60563 726 aaKnown RBP11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 MOCS3O95396 460 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 IFI35P80217 286 aaPredicted RBP11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 CUL1Q13616 776 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 SLC39A14Q15043 492 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 PROSER3Q2NL68 480 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 CFAP221Q4G0U5 840 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 TTLL11Q8NHH1 800 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 SPOCK3Q9BQ16 436 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 SH2D4AQ9H788 454 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 MTRF1LQ9UGC7 380 aaKnown RBP11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 CHKBQ9Y259 395 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 IFT52Q9Y366 437 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 PCDHGB3Q9Y5G1 929 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 ABCA8O94911 1581 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 A8MX80 341 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 DDX3XO00571 662 aaKnown RBP eCLIP11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 SH2B2O14492 632 aaPredicted RBP11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 RSL1D1O76021 490 aaKnown RBP11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 ESRRAP11474 423 aaPredicted RBP11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 ALAS1P13196 640 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 STX2P32856 288 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 SEPT6Q14141 434 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 KIF6Q6ZMV9 814 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 PDZD8Q8NEN9 1154 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 DHRS9Q9BPW9 319 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 MRPL9Q9BYD2 267 aaKnown RBP11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 INO80BQ9C086 356 aaPredicted RBP11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 EPB41L4BQ9H329 900 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 POU2F3Q9UKI9 436 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 ASAP1Q9ULH1 1129 aa11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.72□□□□□ -0.53
SEMA4B-204ENST00000558065 A0A1W2PP64 1363 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 ALOX15BO15296 676 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 TSPAN9O75954 239 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 FDPSP14324 419 aaKnown RBP11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 CD44P16070 742 aaKnown RBP11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 ZNF12P17014 697 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 POLGP54098 1239 aaPredicted RBP11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 VCPP55072 806 aaKnown RBP11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 NXNQ6DKJ4 435 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 CYB5R4Q7L1T6 521 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 CCDC82Q8N4S0 544 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 ATP6V0D2Q8N8Y2 350 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 CALML6Q8TD86 181 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 FAR2Q96K12 515 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 AIFM2Q9BRQ8 373 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 MXD3Q9BW11 206 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 ATPIF1Q9UII2 106 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 MAD1L1Q9Y6D9 718 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 DEPDC5O75140 1603 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 FAM196BA6NMK8 535 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 ACSL4O60488 711 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 CYP27A1Q02318 531 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 CDK18Q07002 472 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 RASGRF1Q13972 1273 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 KRT31Q15323 416 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 NUDT16Q96DE0 195 aaKnown RBP11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 SLAIN2Q9P270 581 aa11.71□□□□□ -0.53
SEMA4B-204ENST00000558065 USP42Q9H9J4 1324 aaKnown RBP11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 CCDC160A6NGH7 325 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 TSPY2A6NKD2 308 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 TSPY3P0CV98 308 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 TSPY8P0CW00 308 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 PRKACAP17612 351 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 PPARGP37231 505 aaPredicted RBP11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 TSPY1Q01534 308 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 CHRNEQ04844 493 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 UGT2A3Q6UWM9 527 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 HERVK_113Q902F9 699 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 TCF7L2Q9NQB0 619 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 ZDHHC7Q9NXF8 308 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 KLHL14Q9P2G3 628 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 LRWD1Q9UFC0 647 aa11.71□□□□□ -0.54
SEMA4B-204ENST00000558065 EIF3BP55884 814 aaKnown RBP11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 PPP2R2BQ00005 443 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 DENND2CQ68D51 928 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 GALNT7Q86SF2 657 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 GLRX5Q86SX6 157 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 VSIG1Q86XK7 387 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 ADSSL1Q8N142 457 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 PCYOX1LQ8NBM8 494 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 CHPT1Q8WUD6 406 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 PGBD4Q96DM1 585 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 FAM227BQ96M60 508 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 MAP3K14Q99558 947 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 CADM1Q9BY67 442 aaKnown RBP11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 TXLNGYQ9BZA5 131 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 RNF38Q9H0F5 515 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 ZNF330Q9Y3S2 320 aaPredicted RBP11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 NDC80O14777 642 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 BAIAP3O94812 1187 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 PCNAP12004 261 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 SCNN1DP51172 638 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 CEP78Q5JTW2 689 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 TMEM63BQ5T3F8 832 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 TUBA3EQ6PEY2 450 aa11.7□□□□□ -0.54
SEMA4B-204ENST00000558065 BORAQ6PGQ7 559 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms