RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 HNRNPH3P31942 346 aaKnown RBP11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 GPC5P78333 572 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 CDR2Q01850 454 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 KLC1Q07866 573 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 PPP1R21Q6ZMI0 780 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 MASTLQ96GX5 879 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 RMDN2Q96LZ7 410 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 RPS6KC1Q96S38 1066 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 BSDC1Q9NW68 430 aaPredicted RBP11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 COL4A5P29400 1685 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 EMSYQ7Z589 1322 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 FAM187AA6NFU0 413 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 CIB2O75838 187 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 PYGMP11217 842 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 SLC8A3P57103 927 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 GRAPQ13588 217 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 BBS9Q3SYG4 887 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 C6orf89Q6UWU4 347 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 GRAPLQ8TC17 118 aaPredicted RBP11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 CCDC124Q96CT7 223 aaKnown RBP11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 FAM161BQ96MY7 647 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 MKNK1Q9BUB5 465 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 SYNGAP1Q96PV0 1343 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 SGK1O00141 431 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 PPP2R5CQ13362 524 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 RCN1Q15293 331 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 CNGA2Q16280 664 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 FAM43BQ6ZT52 329 aaPredicted RBP11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 EXOC3L1Q86VI1 746 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 CPXCR1Q8N123 301 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 FGD4Q96M96 766 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 AJAP1Q9UKB5 411 aaPredicted RBP11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 IGSF9BQ9UPX0 1349 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 MYO5AQ9Y4I1 1855 aaKnown RBP11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 PALM3A6NDB9 673 aaPredicted RBP11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 ANKRD63C9JTQ0 380 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 RIPK2O43353 540 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 SKIP12755 728 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 PIK3CAP42336 1068 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 AUHQ13825 339 aaKnown RBP11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 ZNF662Q6ZS27 426 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 IRF2BP2Q7Z5L9 587 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 FITM2Q8N6M3 262 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 CYP2W1Q8TAV3 490 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 KAT5Q92993 513 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 AGPAT1Q99943 283 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 SYT17Q9BSW7 474 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 SHCBP1LQ9BZQ2 653 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 PPIP5K2O43314 1243 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 TNFRSF8P28908 595 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 KDSRQ06136 332 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 IZUMO3Q5VZ72 239 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 SLFN13Q68D06 897 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 CATSPER3Q86XQ3 398 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 PALM2Q8IXS6 379 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 AIPL1Q9NZN9 384 aa11.63□□□□□ -0.55
CCDC85C-207ENST00000557769 TISP43B9A030 160 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 MGRN1O60291 552 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 PFDN1O60925 122 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 FMO5P49326 533 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 PTENP60484 403 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 ARHGAP4P98171 946 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 DHX34Q14147 1143 aaKnown RBP11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 DCUN1D2Q6PH85 259 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 ZBED8Q8IZ13 594 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 MYLK2Q9H1R3 596 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 PNMA6FA0A0J9YX94 578 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 NVLO15381 856 aaKnown RBP11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 ZBED4O75132 1171 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 COILP38432 576 aaPredicted RBP11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 EPHB1P54762 984 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 SPARCL1Q14515 664 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 ITIH4Q14624 930 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 PSMD6Q15008 389 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 SEPT2Q15019 361 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 SLC35G1Q2M3R5 365 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 QRICH1Q2TAL8 776 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 LRRC23Q53EV4 343 aaPredicted RBP11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 ZNF570Q96NI8 536 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 C12orf65Q9H3J6 166 aaKnown RBP11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 TRABDQ9H4I3 376 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 PARVGQ9HBI0 331 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 GINM1Q9NU53 330 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 TYW1Q9NV66 732 aaKnown RBP11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 PPARGC1AQ9UBK2 798 aaKnown RBP11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 CCDC88AQ3V6T2 1871 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 PSME4Q14997 1843 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 KIAA0391O15091 583 aaKnown RBP11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 GHRP10912 638 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 CHKAP35790 457 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 NOP14P78316 857 aaKnown RBP11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 ZNF394Q53GI3 561 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 BSPRYQ5W0U4 402 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 SLC25A41Q8N5S1 370 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 LNX1Q8TBB1 728 aaPredicted RBP11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 CPA5Q8WXQ8 436 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 FAXDC2Q96IV6 333 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 SYNCQ9H7C4 482 aa11.62□□□□□ -0.55
CCDC85C-207ENST00000557769 A1CFQ9NQ94 594 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms