RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 POMGNT1Q8WZA1 660 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 LRCH3Q96II8 777 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 MSTO1Q9BUK6 570 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 LMAN2LQ9H0V9 348 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 LMBRD1Q9NUN5 540 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 TYW1Q9NV66 732 aaKnown RBP14.94□□□□□ -0.02
SHMT2-234ENST00000557703 TBC1D13Q9NVG8 400 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 TBC1D7Q9P0N9 293 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 ANKFY1Q9P2R3 1169 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 AGO2Q9UKV8 859 aaKnown RBP14.94□□□□□ -0.02
SHMT2-234ENST00000557703 LZTS1Q9Y250 596 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 CHD9Q3L8U1 2897 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 LCHNA4D1U4 455 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 H3BNC9 293 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 XPOTO43592 962 aaKnown RBP14.93□□□□□ -0.02
SHMT2-234ENST00000557703 RECQL4O94761 1208 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 MBD3O95983 291 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 ALDH2P05091 517 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 MYOGP15173 224 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 KCNE1P15382 129 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 PAX3P23760 479 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 CASP5P51878 434 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 PLCB3Q01970 1234 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 KRT17Q04695 432 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 STK4Q13043 487 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 BMS1Q14692 1282 aaKnown RBP14.93□□□□□ -0.02
SHMT2-234ENST00000557703 EPC2Q52LR7 807 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 ZNF658Q5TYW1 1059 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-234ENST00000557703 PDE12Q6L8Q7 609 aaKnown RBP14.93□□□□□ -0.02
SHMT2-234ENST00000557703 CDR2LQ86X02 465 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-234ENST00000557703 FBXO22Q8NEZ5 403 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 SCFD1Q8WVM8 642 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 LPPQ93052 612 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 UROC1Q96N76 676 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 ZNF558Q96NG5 402 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 GAD1Q99259 594 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 ASB7Q9H672 318 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 CWH43Q9H720 699 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 SLC39A2Q9NP94 309 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 SNTG2Q9NY99 539 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 CNTN3Q9P232 1028 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 PUF60Q9UHX1 559 aaKnown RBP14.93□□□□□ -0.02
SHMT2-234ENST00000557703 DERAQ9Y315 318 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 HES2Q9Y543 173 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 PCDHA5Q9Y5H7 936 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 MRPL42Q9Y6G3 142 aaKnown RBP14.93□□□□□ -0.02
SHMT2-234ENST00000557703 RALGAPA2Q2PPJ7 1873 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 GBF1Q92538 1859 aa14.93□□□□□ -0.02
SHMT2-234ENST00000557703 FAM189A1O60320 539 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 PRPF6O94906 941 aaKnown RBP14.92□□□□□ -0.02
SHMT2-234ENST00000557703 IL18RAPO95256 599 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 LINC00271P0C7V0 271 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 AKAP5P24588 427 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 DSC1Q08554 894 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 STIM1Q13586 685 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 SURF1Q15526 300 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 NFIL3Q16649 462 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 PTPROQ16827 1216 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 SPOUT1Q5T280 376 aaKnown RBP14.92□□□□□ -0.02
SHMT2-234ENST00000557703 ARMCX5Q6P1M9 558 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 SLC39A4Q6P5W5 647 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 FOXR2Q6PJQ5 311 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 SLC9A9Q8IVB4 645 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 THNSL1Q8IYQ7 743 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 DEFB123Q8N688 67 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 GSTCDQ8NEC7 633 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 DDX27Q96GQ7 796 aaKnown RBP14.92□□□□□ -0.02
SHMT2-234ENST00000557703 ZBTB45Q96K62 511 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-234ENST00000557703 GAS2L1Q99501 681 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-234ENST00000557703 TTYH1Q9H313 450 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-234ENST00000557703 RPF1Q9H9Y2 349 aaKnown RBP14.92□□□□□ -0.02
SHMT2-234ENST00000557703 SPG21Q9NZD8 308 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 CPSF3Q9UKF6 684 aaKnown RBP14.92□□□□□ -0.02
SHMT2-234ENST00000557703 CITO14578 2027 aa14.92□□□□□ -0.02
SHMT2-234ENST00000557703 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-234ENST00000557703 TTC26A0AVF1 554 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 CYP3A5P20815 502 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 CASP1P29466 404 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 ADSSP30520 456 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 RPL9P32969 192 aaKnown RBP14.91□□□□□ -0.02
SHMT2-234ENST00000557703 CTNNB1P35222 781 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 MLH1P40692 756 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 PPP2R3AQ06190 1150 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 KCNA1Q09470 495 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 TUSC3Q13454 348 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 PNOCQ13519 176 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 TPRNQ4KMQ1 711 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 PAN2Q504Q3 1202 aaKnown RBP14.91□□□□□ -0.02
SHMT2-234ENST00000557703 KCNT2Q6UVM3 1135 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 LRRC55Q6ZSA7 311 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 ZBTB33Q86T24 672 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 GPR65Q8IYL9 337 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 COLGALT1Q8NBJ5 622 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 KIAA0895Q8NCT3 520 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 SNX27Q96L92 541 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 MTMR10Q9NXD2 777 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 TRAF3IP3Q9Y228 551 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 INPP5FQ9Y2H2 1132 aa14.91□□□□□ -0.02
SHMT2-234ENST00000557703 GDAQ9Y2T3 454 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms