RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 COL5A3P25940 1745 aaPredicted RBP11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 EIF3FO00303 357 aaPredicted RBP11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 ENTPD5O75356 428 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 ALAS1P13196 640 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 CREB1P16220 341 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 TAC1P20366 129 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 TARSP26639 723 aaKnown RBP11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 SERPINB4P48594 390 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 FKBP3Q00688 224 aaKnown RBP11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 MPP2Q14168 576 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 KPNB1Q14974 876 aaKnown RBP11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 PARP10Q53GL7 1025 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 BICDL1Q6ZP65 573 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 VSIG1Q86XK7 387 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 CCNJLQ8IV13 435 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 FLCNQ8NFG4 579 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 RASGRP4Q8TDF6 673 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 KIAA1683Q9H0B3 1180 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 BLOC1S4Q9NUP1 217 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 GALNT8Q9NY28 637 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 HAO1Q9UJM8 370 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 PCDHA6Q9UN73 950 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 TBC1D30Q9Y2I9 924 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 STARD13Q9Y3M8 1113 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 PCDHA8Q9Y5H6 950 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 H0Y3Z8 333 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 PFASO15067 1338 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 GNA14O95837 355 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 H2AFZP0C0S5 128 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 OR52Z1P0C646 297 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 PCP11498 1178 aaKnown RBP11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 HARSP12081 509 aaKnown RBP11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 FGFR4P22455 802 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 EPHB2P29323 1055 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 RPL21P46778 160 aaKnown RBP11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 RASSF2P50749 326 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 SNX30Q5VWJ9 437 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 H2AFVQ71UI9 128 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 CCDC80Q76M96 950 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 SV2BQ7L1I2 683 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 DNAJC10Q8IXB1 793 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 SYCP3Q8IZU3 236 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 DCLK2Q8N568 766 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 CCDC89Q8N998 374 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 NRG4Q8WWG1 115 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 SCG3Q8WXD2 468 aaKnown RBP11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 NELL1Q92832 810 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 NR1H4Q96RI1 486 aaPredicted RBP11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 UIMC1Q96RL1 719 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 SPATA16Q9BXB7 569 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 KIF13BQ9NQT8 1826 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 PCYOX1Q9UHG3 505 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 USH1CQ9Y6N9 552 aa11.19□□□□□ -0.62
SUPT16H-207ENST00000557394 SMIM22K7EJ46 135 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 MAGEB2O15479 319 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 STARD3NLO95772 234 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 RPL17P18621 184 aaKnown RBP11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 MCL1Q07820 350 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 RASGRF1Q13972 1273 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 GALNT17Q6IS24 598 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 C4orf50Q6ZRC1 276 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 TRMT10CQ7L0Y3 403 aaKnown RBP11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 STKLD1Q8NE28 680 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 GIPC2Q8TF65 315 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 LZICQ8WZA0 190 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 ART4Q93070 314 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 SLC4A9Q96Q91 983 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 CASS4Q9NQ75 786 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 DDX43Q9NXZ2 648 aaKnown RBP11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 STK17AQ9UEE5 414 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 LNPEPQ9UIQ6 1025 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 COMMD3-BMI1R4GMX3 469 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 NCANO14594 1321 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 MINDY4BA8MYZ0 360 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 PODXLO00592 558 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 MAPK13O15264 365 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 PHF2O75151 1096 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 GH1P01241 217 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 S100BP04271 92 aaPredicted RBP11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 CYP1A1P04798 512 aaPredicted RBP11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 INHBCP55103 352 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 SIK1P57059 783 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 PPATQ06203 517 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 MOGSQ13724 837 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 KHDC1Q4VXA5 237 aaKnown RBP11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 OLFML1Q6UWY5 402 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 DZIP1Q86YF9 867 aaKnown RBP11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 NELFCDQ8IXH7 590 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 ZC3H3Q8IXZ2 948 aaKnown RBP11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 ANKRD42Q8N9B4 389 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 ZBTB38Q8NAP3 1195 aaPredicted RBP11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 C7orf43Q8WVR3 580 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 CCDC87Q9NVE4 849 aa11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 ARMCX3Q9UH62 379 aaPredicted RBP11.18□□□□□ -0.62
SUPT16H-207ENST00000557394 SLC26A4O43511 780 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 B3GALNT1O75752 331 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 DCTN3O75935 186 aa11.17□□□□□ -0.62
SUPT16H-207ENST00000557394 MARK3P27448 753 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms