RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 GRM5P41594 1212 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 NCKAP1LP55160 1127 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 KRT85P78386 507 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 TUSC3Q13454 348 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 NOLC1Q14978 699 aaKnown RBP eCLIP15.13■□□□□ 0.01
VPS33B-206ENST00000557358 DUSP6Q16828 381 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 ARSHQ5FYA8 562 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 EEF1DP3Q658K8 133 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 PTCRAQ6ISU1 281 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-206ENST00000557358 USP49Q70CQ1 688 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 ZBTB33Q86T24 672 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 COLGALT2Q8IYK4 626 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 MRPL43Q8N983 215 aaKnown RBP15.13■□□□□ 0.01
VPS33B-206ENST00000557358 IQUBQ8NA54 791 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 ACAP3Q96P50 834 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 UHRF1Q96T88 793 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-206ENST00000557358 MRPL17Q9NRX2 175 aaKnown RBP15.13■□□□□ 0.01
VPS33B-206ENST00000557358 SLC38A7Q9NVC3 462 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-206ENST00000557358 A0A0C4DFX4 3053 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 UNC80Q8N2C7 3258 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 HNRNPDLO14979 420 aaKnown RBP15.12■□□□□ 0.01
VPS33B-206ENST00000557358 TADA2AO75478 443 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 IDEP14735 1019 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 KCNQ1P51787 676 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 ZNF131P52739 623 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 DSC1Q08554 894 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 ELAVL2Q12926 359 aaKnown RBP15.12■□□□□ 0.01
VPS33B-206ENST00000557358 ADAM15Q13444 863 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 STXBP4Q6ZWJ1 553 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 DYMQ7RTS9 669 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 ADGRD2Q7Z7M1 963 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 PDILTQ8N807 584 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 DDX12PQ92771 950 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 CASP10Q92851 521 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 COL25A1Q9BXS0 654 aaPredicted RBP15.12■□□□□ 0.01
VPS33B-206ENST00000557358 PANK2Q9BZ23 570 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 DPP7Q9UHL4 492 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 CD207Q9UJ71 328 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 EXOC7Q9UPT5 735 aa15.12■□□□□ 0.01
VPS33B-206ENST00000557358 TCF20Q9UGU0 1960 aaKnown RBP15.12■□□□□ 0.01
VPS33B-206ENST00000557358 CITO14578 2027 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 NCOR1O75376 2440 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 TTLL13PA6NNM8 815 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 PER2O15055 1255 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 BMP1P13497 986 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 AFF1P51825 1210 aaKnown RBP15.11■□□□□ 0.01
VPS33B-206ENST00000557358 CREMQ03060 361 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 COL19A1Q14993 1142 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 CTC1Q2NKJ3 1217 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 TPRNQ4KMQ1 711 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 CCDC65Q8IXS2 484 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 UROC1Q96N76 676 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 ZBP1Q9H171 429 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 CDT1Q9H211 546 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 TNMDQ9H2S6 317 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 MRPL44Q9H9J2 332 aaKnown RBP15.11■□□□□ 0.01
VPS33B-206ENST00000557358 MAGEF1Q9HAY2 307 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 TBX20Q9UMR3 447 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 USP20Q9Y2K6 914 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 IRAK3Q9Y616 596 aa15.11■□□□□ 0.01
VPS33B-206ENST00000557358 SF3B1O75533 1304 aaKnown RBP eCLIP15.11■□□□□ 0.018e-6■■■■■ 107
VPS33B-206ENST00000557358 ATG2AQ2TAZ0 1938 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 C2orf71A6NGG8 1288 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 XPOTO43592 962 aaKnown RBP15.1■□□□□ 0.01
VPS33B-206ENST00000557358 BRD1O95696 1058 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 SOD2P04179 222 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 HOXB8P17481 243 aaPredicted RBP15.1■□□□□ 0.01
VPS33B-206ENST00000557358 GLUD2P49448 558 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 OSTNP61366 133 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 DNM1Q05193 864 aaKnown RBP15.1■□□□□ 0.01
VPS33B-206ENST00000557358 SMAD4Q13485 552 aaKnown RBP15.1■□□□□ 0.01
VPS33B-206ENST00000557358 ALCAMQ13740 583 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 HSP90AA2PQ14568 343 aaPredicted RBP15.1■□□□□ 0.01
VPS33B-206ENST00000557358 HERC4Q5GLZ8 1057 aaPredicted RBP15.1■□□□□ 0.01
VPS33B-206ENST00000557358 SLFN12LQ6IEE8 588 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 KCNN1Q92952 543 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 DHX58Q96C10 678 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 HVCN1Q96D96 273 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 DDX27Q96GQ7 796 aaKnown RBP15.1■□□□□ 0.01
VPS33B-206ENST00000557358 SPATA32Q96LK8 384 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 POP1Q99575 1024 aaKnown RBP15.1■□□□□ 0.01
VPS33B-206ENST00000557358 HERC2P3Q9BVR0 1158 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 PTPRHQ9HD43 1115 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 MIOSQ9NXC5 875 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 ADAM28Q9UKQ2 775 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 PCDHB13Q9Y5F0 798 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 PCDHGC5Q9Y5F6 944 aa15.1■□□□□ 0.01
VPS33B-206ENST00000557358 GRXCR2A6NFK2 248 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 CASTOR2A6NHX0 329 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 HIDE1A8MVS5 230 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 ADH1AP07327 375 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 PROZP22891 400 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 KLRC2P26717 231 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 GTF2F1P35269 517 aaKnown RBP eCLIP15.09■□□□□ 0.01
VPS33B-206ENST00000557358 NUCB2P80303 420 aa15.09■□□□□ 0.01
VPS33B-206ENST00000557358 POSTNQ15063 836 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms