RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 IFT122Q9HBG6 1241 aa11.26□□□□□ -0.61
APEX1-218ENST00000557344 LTB4R2Q9NPC1 389 aa11.26□□□□□ -0.61
APEX1-218ENST00000557344 SUCLA2Q9P2R7 463 aaPredicted RBP11.26□□□□□ -0.61
APEX1-218ENST00000557344 CDH7Q9ULB5 785 aa11.26□□□□□ -0.61
APEX1-218ENST00000557344 MIA3Q5JRA6 1907 aa11.26□□□□□ -0.61
APEX1-218ENST00000557344 CHD8Q9HCK8 2581 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 CHD6Q8TD26 2715 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 COL4A3Q01955 1670 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 ZMYND10O75800 440 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 OR1G1P47890 313 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 DSC1Q08554 894 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 XKR3Q5GH77 459 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 PPM1JQ5JR12 505 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 UBXN11Q5T124 520 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 ANO5Q75V66 913 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 CCDC83Q8IWF9 413 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 CHAMP1Q96JM3 812 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 NLRP4Q96MN2 994 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 NELL2Q99435 816 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 SH2D3AQ9BRG2 576 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 LLPHQ9BRT6 129 aaKnown RBP11.25□□□□□ -0.61
APEX1-218ENST00000557344 ANP32EQ9BTT0 268 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 FNIP2Q9P278 1114 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 WRAP73Q9P2S5 460 aaPredicted RBP11.25□□□□□ -0.61
APEX1-218ENST00000557344 SEPT9Q9UHD8 586 aaPredicted RBP11.25□□□□□ -0.61
APEX1-218ENST00000557344 USP24Q9UPU5 2620 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 PATJQ8NI35 1801 aa11.25□□□□□ -0.61
APEX1-218ENST00000557344 F8W810 466 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 SLC30A4O14863 429 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 MAFO75444 373 aaPredicted RBP11.24□□□□□ -0.61
APEX1-218ENST00000557344 NCLP19338 710 aaKnown RBP11.24□□□□□ -0.61
APEX1-218ENST00000557344 CD72P21854 359 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 HOXA11P31270 313 aaPredicted RBP11.24□□□□□ -0.61
APEX1-218ENST00000557344 RPS9P46781 194 aaKnown RBP11.24□□□□□ -0.61
APEX1-218ENST00000557344 FOSBP53539 338 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 PSMC5P62195 406 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 PFKPQ01813 784 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 ZBTB41Q5SVQ8 909 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 TSSK4Q6SA08 328 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 MTSS1LQ765P7 747 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 GRASPQ7Z6J2 395 aaPredicted RBP11.24□□□□□ -0.61
APEX1-218ENST00000557344 B3GALT6Q96L58 329 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
APEX1-218ENST00000557344 FAM126AQ9BYI3 521 aaPredicted RBP11.24□□□□□ -0.61
APEX1-218ENST00000557344 BRMS1Q9HCU9 246 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 UBN1Q9NPG3 1134 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 PRMT8Q9NR22 394 aaPredicted RBP11.24□□□□□ -0.61
APEX1-218ENST00000557344 SH2B1Q9NRF2 756 aaPredicted RBP11.24□□□□□ -0.61
APEX1-218ENST00000557344 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.24□□□□□ -0.61
APEX1-218ENST00000557344 GMEB2Q9UKD1 530 aa11.24□□□□□ -0.61
APEX1-218ENST00000557344 MTCL1Q9Y4B5 1905 aaKnown RBP11.24□□□□□ -0.61
APEX1-218ENST00000557344 MYH15Q9Y2K3 1946 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 DOCK6Q96HP0 2047 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 NCAM2O15394 837 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 TARSP26639 723 aaKnown RBP11.23□□□□□ -0.61
APEX1-218ENST00000557344 QARSP47897 775 aaKnown RBP11.23□□□□□ -0.61
APEX1-218ENST00000557344 NTHL1P78549 312 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 GUCY1B3Q02153 619 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 FZD5Q13467 585 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 TRIM29Q14134 588 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 EPHA7Q15375 998 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 GLYCTKQ8IVS8 523 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 SLFN12Q8IYM2 578 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
APEX1-218ENST00000557344 SMG8Q8ND04 991 aaKnown RBP11.23□□□□□ -0.61
APEX1-218ENST00000557344 CNNM3Q8NE01 707 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 NETO1Q8TDF5 533 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 FGF13Q92913 245 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 MTMR9Q96QG7 549 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 GPR62Q9BZJ7 368 aa11.23□□□□□ -0.61
APEX1-218ENST00000557344 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.23□□□□□ -0.61
APEX1-218ENST00000557344 ARL5CA6NH57 179 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 DDX11L8A8MPP1 907 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 P4HBP07237 508 aaKnown RBP11.22□□□□□ -0.61
APEX1-218ENST00000557344 ITGA4P13612 1032 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 RPL17P18621 184 aaKnown RBP11.22□□□□□ -0.61
APEX1-218ENST00000557344 SPEM2Q0P670 501 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 RABEP1Q15276 862 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 USP41Q3LFD5 358 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 PLA2G4FQ68DD2 849 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 LAIR1Q6GTX8 287 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 NCAPH2Q6IBW4 605 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 FUT10Q6P4F1 479 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 SRGAP1Q7Z6B7 1085 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 C4orf19Q8IY42 314 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 FBXO18Q8NFZ0 1043 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 C8orf76Q96K31 380 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 GAD1Q99259 594 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 HSD17B14Q9BPX1 270 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 JPH2Q9BR39 696 aaPredicted RBP11.22□□□□□ -0.61
APEX1-218ENST00000557344 LXNQ9BS40 222 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 COLEC11Q9BWP8 271 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 MINDY3Q9H8M7 445 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 MIOSQ9NXC5 875 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 RGL1Q9NZL6 768 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 COL4A3BPQ9Y5P4 624 aa11.22□□□□□ -0.61
APEX1-218ENST00000557344 BAHCC1Q9P281 2608 aa11.21□□□□□ -0.61
APEX1-218ENST00000557344 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.21□□□□□ -0.61
APEX1-218ENST00000557344 SHISA7A6NL88 538 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms