RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 AFF1P51825 1210 aaKnown RBP11.35□□□□□ -0.59
RDH11-210ENST00000557331 HSP90AA2PQ14568 343 aaPredicted RBP11.35□□□□□ -0.59
RDH11-210ENST00000557331 MLF2Q15773 248 aaPredicted RBP11.35□□□□□ -0.59
RDH11-210ENST00000557331 SLC44A4Q53GD3 710 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 XKR9Q5GH70 373 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 PPM1LQ5SGD2 360 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 PLA2G4FQ68DD2 849 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 NEK8Q86SG6 692 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 PIK3R5Q8WYR1 880 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 CCDC43Q96MW1 224 aaKnown RBP11.35□□□□□ -0.59
RDH11-210ENST00000557331 LXNQ9BS40 222 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 ANKEF1Q9NU02 776 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 GDE1Q9NZC3 331 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 FBXW11Q9UKB1 542 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 VAV3Q9UKW4 847 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 MED19A0JLT2 244 aaPredicted RBP11.34□□□□□ -0.59
RDH11-210ENST00000557331 FAM170BA6NMN3 283 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 EML1O00423 815 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 LYPLA2O95372 231 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 SPATA31D3P0C874 917 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 GPC5P78333 572 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 TUSC3Q13454 348 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 RSPO4Q2I0M5 234 aaPredicted RBP11.34□□□□□ -0.59
RDH11-210ENST00000557331 ZNF852Q6ZMS4 543 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 SPATA31D4Q6ZUB0 917 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 ZBTB44Q8NCP5 570 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 FGF13Q92913 245 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 GJA10Q969M2 543 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 CLDN23Q96B33 292 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 RTKNQ9BST9 563 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 GPR62Q9BZJ7 368 aa11.34□□□□□ -0.59
RDH11-210ENST00000557331 AVENQ9NQS1 362 aaPredicted RBP11.34□□□□□ -0.59
RDH11-210ENST00000557331 MAN2B1O00754 1011 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 TRAPPC3O43617 180 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 LRP3O75074 770 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 ECI2O75521 394 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 ARF4P18085 180 aaPredicted RBP11.33□□□□□ -0.6
RDH11-210ENST00000557331 CCT2P78371 535 aaKnown RBP11.33□□□□□ -0.6
RDH11-210ENST00000557331 MBTD1Q05BQ5 628 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 SNW1Q13573 536 aaKnown RBP11.33□□□□□ -0.6
RDH11-210ENST00000557331 RAB33AQ14088 237 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 UBXN2BQ14CS0 331 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 INF2Q27J81 1249 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 C1orf228Q6PIY5 440 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 APBB1IPQ7Z5R6 666 aaPredicted RBP11.33□□□□□ -0.6
RDH11-210ENST00000557331 GRASPQ7Z6J2 395 aaPredicted RBP11.33□□□□□ -0.6
RDH11-210ENST00000557331 GSTCDQ8NEC7 633 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 NELL1Q92832 810 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 FGF14Q92915 247 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 ZFP42Q96MM3 310 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 PHF20Q9BVI0 1012 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 EIF2AQ9BY44 585 aaKnown RBP11.33□□□□□ -0.6
RDH11-210ENST00000557331 FOXQ1Q9C009 403 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 EPC1Q9H2F5 836 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 RNF39Q9H2S5 420 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 PRMT7Q9NVM4 692 aaPredicted RBP11.33□□□□□ -0.6
RDH11-210ENST00000557331 GMEB2Q9UKD1 530 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 CDV3Q9UKY7 258 aaKnown RBP11.33□□□□□ -0.6
RDH11-210ENST00000557331 RAB23Q9ULC3 237 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 SNX14Q9Y5W7 946 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 CHD8Q9HCK8 2581 aa11.33□□□□□ -0.6
RDH11-210ENST00000557331 CNOT1A5YKK6 2376 aaKnown RBP11.33□□□□□ -0.6
RDH11-210ENST00000557331 TDRD15B5MCY1 1934 aaKnown RBP11.33□□□□□ -0.6
RDH11-210ENST00000557331 CCNT1O60563 726 aaKnown RBP11.32□□□□□ -0.6
RDH11-210ENST00000557331 MICAL2O94851 1124 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 THP07101 528 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 C8AP07357 584 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 GLULP15104 373 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 ARL2P36404 184 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 RBM25P49756 843 aaKnown RBP11.32□□□□□ -0.6
RDH11-210ENST00000557331 CSTF1Q05048 431 aaKnown RBP11.32□□□□□ -0.6
RDH11-210ENST00000557331 PSMD5Q16401 504 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 FAM171A1Q5VUB5 890 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 PARM1Q6UWI2 310 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.32□□□□□ -0.6
RDH11-210ENST00000557331 PPP4R3CPQ6ZMV5 832 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 RUFY3Q7L099 469 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 TPH2Q8IWU9 490 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 MAML2Q8IZL2 1156 aaPredicted RBP11.32□□□□□ -0.6
RDH11-210ENST00000557331 MCPH1Q8NEM0 835 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 FEZF2Q8TBJ5 459 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 WASF1Q92558 559 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 DNASE1L2Q92874 299 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 ADPGKQ9BRR6 497 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 C2orf40Q9H1Z8 148 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 LTB4R2Q9NPC1 389 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 MIOSQ9NXC5 875 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 PARP2Q9UGN5 583 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 CYP46A1Q9Y6A2 500 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 MIA3Q5JRA6 1907 aa11.32□□□□□ -0.6
RDH11-210ENST00000557331 CACNA1GO43497 2377 aa11.31□□□□□ -0.6
RDH11-210ENST00000557331 N4BP3O15049 544 aa11.31□□□□□ -0.6
RDH11-210ENST00000557331 SLC37A4O43826 429 aa11.31□□□□□ -0.6
RDH11-210ENST00000557331 LILRB5O75023 590 aa11.31□□□□□ -0.6
RDH11-210ENST00000557331 SLITRK3O94933 977 aa11.31□□□□□ -0.6
RDH11-210ENST00000557331 ADCY1Q08828 1119 aa11.31□□□□□ -0.6
RDH11-210ENST00000557331 SPIRE1Q08AE8 756 aa11.31□□□□□ -0.6
RDH11-210ENST00000557331 AMHR2Q16671 573 aa11.31□□□□□ -0.6
RDH11-210ENST00000557331 FAM187BQ17R55 369 aa11.31□□□□□ -0.6
RDH11-210ENST00000557331 PABPC1LQ4VXU2 614 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms