RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 CDR2LQ86X02 465 aaPredicted RBP13.67□□□□□ -0.22
SNX6-209ENST00000557265 IFNLR1Q8IU57 520 aaPredicted RBP13.67□□□□□ -0.22
SNX6-209ENST00000557265 SUMF1Q8NBK3 374 aa13.67□□□□□ -0.22
SNX6-209ENST00000557265 ZNF274Q96GC6 653 aaPredicted RBP13.67□□□□□ -0.22
SNX6-209ENST00000557265 CLSTN3Q9BQT9 956 aa13.67□□□□□ -0.22
SNX6-209ENST00000557265 PAAF1Q9BRP4 392 aa13.67□□□□□ -0.22
SNX6-209ENST00000557265 DLL3Q9NYJ7 618 aa13.67□□□□□ -0.22
SNX6-209ENST00000557265 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
SNX6-209ENST00000557265 DNAH14Q0VDD8 3507 aa13.67□□□□□ -0.22
SNX6-209ENST00000557265 C2orf16Q68DN1 1984 aa13.67□□□□□ -0.22
SNX6-209ENST00000557265 SLITRK3O94933 977 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 NPTXRO95502 500 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 SPIRE1Q08AE8 756 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 GRIK3Q13003 919 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 CAPSQ13938 189 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 HSP90AA2PQ14568 343 aaPredicted RBP13.66□□□□□ -0.22
SNX6-209ENST00000557265 SLC44A4Q53GD3 710 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 PPM1LQ5SGD2 360 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 LIN9Q5TKA1 542 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 SLC27A1Q6PCB7 646 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 PIK3AP1Q6ZUJ8 805 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 CENPQQ7L2Z9 268 aaPredicted RBP13.66□□□□□ -0.22
SNX6-209ENST00000557265 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 FGF13Q92913 245 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 TTPALQ9BTX7 342 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 PHF20Q9BVI0 1012 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 BCO2Q9BYV7 579 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 SPATA6Q9NWH7 488 aaPredicted RBP13.66□□□□□ -0.22
SNX6-209ENST00000557265 FBXW11Q9UKB1 542 aa13.66□□□□□ -0.22
SNX6-209ENST00000557265 MTF2Q9Y483 593 aaPredicted RBP13.66□□□□□ -0.22
SNX6-209ENST00000557265 SF3B1O75533 1304 aaKnown RBP eCLIP13.65□□□□□ -0.225e-7■■■■■ 106.3
SNX6-209ENST00000557265 WDR81Q562E7 1941 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 A0A1B0GUA9 196 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 FAM170BA6NMN3 283 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 LAMTOR5O43504 91 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 C8AP07357 584 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 HNRNPA1P09651 372 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNX6-209ENST00000557265 GLRA2P23416 452 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 ARL2P36404 184 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 CSTF1Q05048 431 aaKnown RBP13.65□□□□□ -0.22
SNX6-209ENST00000557265 UBXN2BQ14CS0 331 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 MLF2Q15773 248 aaPredicted RBP13.65□□□□□ -0.22
SNX6-209ENST00000557265 RSPO4Q2I0M5 234 aaPredicted RBP13.65□□□□□ -0.22
SNX6-209ENST00000557265 FAM171A1Q5VUB5 890 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 MTSS1LQ765P7 747 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 SLFN12Q8IYM2 578 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 ITFG1Q8TB96 612 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 LNX1Q8TBB1 728 aaPredicted RBP13.65□□□□□ -0.22
SNX6-209ENST00000557265 OXER1Q8TDS5 423 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 HASPINQ8TF76 798 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 NAP1L4Q99733 375 aaKnown RBP13.65□□□□□ -0.22
SNX6-209ENST00000557265 EIF2AK1Q9BQI3 630 aaKnown RBP13.65□□□□□ -0.22
SNX6-209ENST00000557265 DDX23Q9BUQ8 820 aaKnown RBP13.65□□□□□ -0.22
SNX6-209ENST00000557265 NFKBIZQ9BYH8 718 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 GJB4Q9NTQ9 266 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 POLIQ9UNA4 740 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 CYP46A1Q9Y6A2 500 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 DMXL1Q9Y485 3027 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 EPG5Q9HCE0 2579 aa13.65□□□□□ -0.22
SNX6-209ENST00000557265 CASTOR2A6NHX0 329 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 CCL16O15467 120 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 ADAM12O43184 909 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 XYLBO75191 536 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 DGAT1O75907 488 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 KIF4AO95239 1232 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 BAG4O95429 457 aaKnown RBP13.64□□□□□ -0.23
SNX6-209ENST00000557265 CD72P21854 359 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 PRKCQQ04759 706 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 TUSC3Q13454 348 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 PSMD5Q16401 504 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 ZNF528Q3MIS6 628 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
SNX6-209ENST00000557265 PIK3R5Q8WYR1 880 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 HSD17B14Q9BPX1 270 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 ANKEF1Q9NU02 776 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 NCDNQ9UBB6 729 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 FBXO4Q9UKT5 387 aa13.64□□□□□ -0.23
SNX6-209ENST00000557265 DTNBO60941 627 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 REC8O95072 547 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 LYPLA2O95372 231 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 XBP1P17861 261 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 HOXA9P31269 272 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 PFKPQ01813 784 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 EARS2Q5JPH6 523 aaKnown RBP13.63□□□□□ -0.23
SNX6-209ENST00000557265 SLC7A14Q8TBB6 771 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 ATRIPQ8WXE1 791 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 BORCS6Q96GS4 357 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 KXD1Q9BQD3 176 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 OSBPL6Q9BZF3 934 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 POLR3FQ9H1D9 316 aaPredicted RBP13.63□□□□□ -0.23
SNX6-209ENST00000557265 PCDHGA2Q9Y5H1 932 aa13.63□□□□□ -0.23
SNX6-209ENST00000557265 TPRP12270 2363 aaKnown RBP13.63□□□□□ -0.23
SNX6-209ENST00000557265 FRYLO94915 3013 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 ZMYM2Q9UBW7 1377 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 CACNA1IQ9P0X4 2223 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 A0A087WWV3 80 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 FAM205CA6NFA0 338 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 PTGESO14684 152 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 SPTLC1O15269 473 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms