RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 PRKCBP05771 671 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 THP07101 528 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 SPATA31D3P0C874 917 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 TUSC3Q13454 348 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 HSP90AA2PQ14568 343 aaPredicted RBP17.54■□□□□ 0.4
TUBB3-213ENST00000557262 SPATA31D4Q6ZUB0 917 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 RIN2Q8WYP3 895 aaPredicted RBP17.54■□□□□ 0.4
TUBB3-213ENST00000557262 IFT74Q96LB3 600 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 KIF2CQ99661 725 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 ADPGKQ9BRR6 497 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 CCDC113Q9H0I3 377 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 WDR6Q9NNW5 1121 aaKnown RBP17.54■□□□□ 0.4
TUBB3-213ENST00000557262 SNTG2Q9NY99 539 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 STK24Q9Y6E0 443 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 TDRD15B5MCY1 1934 aaKnown RBP17.54■□□□□ 0.4
TUBB3-213ENST00000557262 KMT2EQ8IZD2 1858 aa17.54■□□□□ 0.4
TUBB3-213ENST00000557262 TGM5O43548 720 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 MYBP10242 640 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 LIG1P18858 919 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 U2AF2P26368 475 aaKnown RBP eCLIP17.53■□□□□ 0.4
TUBB3-213ENST00000557262 EFNA5P52803 228 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 CREMQ03060 361 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 TDGQ13569 410 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 ECM1Q16610 540 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 LILRA6Q6PI73 481 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 STAMQ92783 540 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 KIFAP3Q92845 792 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 PHOX2BQ99453 314 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 PAAF1Q9BRP4 392 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 BHMT2Q9H2M3 363 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 KCNK12Q9HB15 430 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 POLD4Q9HCU8 107 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 IGSF9Q9P2J2 1179 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 KIAA1024Q9UPX6 916 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 USP20Q9Y2K6 914 aa17.53■□□□□ 0.4
TUBB3-213ENST00000557262 PTGESO14684 152 aa17.52■□□□□ 0.4
TUBB3-213ENST00000557262 RFPL2O75678 378 aa17.52■□□□□ 0.4
TUBB3-213ENST00000557262 PAPLNO95428 1278 aa17.52■□□□□ 0.4
TUBB3-213ENST00000557262 GLYCTKQ8IVS8 523 aa17.52■□□□□ 0.4
TUBB3-213ENST00000557262 SMG7Q92540 1137 aaKnown RBP17.52■□□□□ 0.4
TUBB3-213ENST00000557262 RAB34Q9BZG1 259 aa17.52■□□□□ 0.4
TUBB3-213ENST00000557262 NT5C3AQ9H0P0 336 aa17.52■□□□□ 0.4
TUBB3-213ENST00000557262 PIDD1Q9HB75 910 aa17.52■□□□□ 0.4
TUBB3-213ENST00000557262 CACNG4Q9UBN1 327 aa17.52■□□□□ 0.4
TUBB3-213ENST00000557262 SF3B1O75533 1304 aaKnown RBP eCLIP17.51■□□□□ 0.393e-6■■■■■ 137.9
TUBB3-213ENST00000557262 CASTOR2A6NHX0 329 aa17.51■□□□□ 0.39
TUBB3-213ENST00000557262 RECQL4O94761 1208 aa17.51■□□□□ 0.39
TUBB3-213ENST00000557262 RPL17P18621 184 aaKnown RBP17.51■□□□□ 0.39
TUBB3-213ENST00000557262 GBP2P32456 591 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-213ENST00000557262 TOB1P50616 345 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-213ENST00000557262 PTGDRQ13258 359 aa17.51■□□□□ 0.39
TUBB3-213ENST00000557262 NBR1Q14596 966 aa17.51■□□□□ 0.39
TUBB3-213ENST00000557262 EEF1DP3Q658K8 133 aa17.51■□□□□ 0.39
TUBB3-213ENST00000557262 ASTLQ6HA08 431 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-213ENST00000557262 PRSS55Q6UWB4 352 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-213ENST00000557262 IGSF22Q8N9C0 903 aa17.51■□□□□ 0.39
TUBB3-213ENST00000557262 ZNF707Q96C28 371 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-213ENST00000557262 TTPALQ9BTX7 342 aa17.51■□□□□ 0.39
TUBB3-213ENST00000557262 MFSD1Q9H3U5 465 aa17.51■□□□□ 0.39
TUBB3-213ENST00000557262 DDX19AQ9NUU7 478 aaKnown RBP17.51■□□□□ 0.39
TUBB3-213ENST00000557262 ZDHHC7Q9NXF8 308 aa17.51■□□□□ 0.39
TUBB3-213ENST00000557262 CLUHO75153 1309 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 DENND4AQ7Z401 1863 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 K7ERI5 159 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 GALR2O43603 387 aaPredicted RBP17.5■□□□□ 0.39
TUBB3-213ENST00000557262 N4BP1O75113 896 aaKnown RBP17.5■□□□□ 0.39
TUBB3-213ENST00000557262 EDN1P05305 212 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 CLCN5P51795 746 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 ELAVL2Q12926 359 aaKnown RBP17.5■□□□□ 0.39
TUBB3-213ENST00000557262 NAB2Q15742 525 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 DCAF4L1Q3SXM0 396 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 RTP2Q5QGT7 225 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 NT5DC1Q5TFE4 455 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 FAM171A1Q5VUB5 890 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 APBB1IPQ7Z5R6 666 aaPredicted RBP17.5■□□□□ 0.39
TUBB3-213ENST00000557262 CEP57Q86XR8 500 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 TMEM105Q8N8V8 129 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 HASPINQ8TF76 798 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 ATOH1Q92858 354 aaPredicted RBP17.5■□□□□ 0.39
TUBB3-213ENST00000557262 PRKD2Q9BZL6 878 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 CXCL16Q9H2A7 254 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 DNM3Q9UQ16 869 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 GDAQ9Y2T3 454 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 PCDHB6Q9Y5E3 794 aa17.5■□□□□ 0.39
TUBB3-213ENST00000557262 H0Y858 1186 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 LAD1O00515 517 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 ZMYND10O75800 440 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 KIF4AO95239 1232 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 ATF7IP2Q5U623 682 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 KRT79Q5XKE5 535 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 LNX1Q8TBB1 728 aaPredicted RBP17.49■□□□□ 0.39
TUBB3-213ENST00000557262 SNX29Q8TEQ0 813 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 PIK3R5Q8WYR1 880 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 NXPE3Q969Y0 559 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 CLSTN3Q9BQT9 956 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 KIFC3Q9BVG8 833 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.49■□□□□ 0.393e-7■■■□□ 15.4
TUBB3-213ENST00000557262 EPS15L1Q9UBC2 864 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 DUSP12Q9UNI6 340 aa17.49■□□□□ 0.39
TUBB3-213ENST00000557262 PLXNA3P51805 1871 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms