RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 CD207Q9UJ71 328 aa5.62□□□□□ -1.51
SCFD1-223ENST00000557076 FEM1BQ9UK73 627 aa5.62□□□□□ -1.51
SCFD1-223ENST00000557076 CTDP1Q9Y5B0 961 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-223ENST00000557076 FPGT-TNNI3KV9GXZ4 949 aa5.62□□□□□ -1.51
SCFD1-223ENST00000557076 KMT2BQ9UMN6 2715 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-223ENST00000557076 ZFHX4Q86UP3 3567 aa5.62□□□□□ -1.51
SCFD1-223ENST00000557076 SIPA1L1O43166 1804 aa5.62□□□□□ -1.51
SCFD1-223ENST00000557076 LOC102724159A0A0B4J2E5 919 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 C5orf67F2Z3F1 127 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 MYL3P08590 195 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 INHBBP09529 407 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 PTGS1P23219 599 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 YARSP54577 528 aaKnown RBP5.61□□□□□ -1.51
SCFD1-223ENST00000557076 HYAL1Q12794 435 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 PUM1Q14671 1186 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCFD1-223ENST00000557076 PWP2Q15269 919 aaKnown RBP5.61□□□□□ -1.51
SCFD1-223ENST00000557076 NR0B2Q15466 257 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 PTGISQ16647 500 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 TKFCQ3LXA3 575 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 CCDC184Q52MB2 194 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 FAM47CQ5HY64 1035 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 C12orf60Q5U649 245 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 MCTP2Q6DN12 878 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 DGLUCYQ7Z3D6 616 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 RPAINQ86UA6 219 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 SESTD1Q86VW0 696 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 SPPL2CQ8IUH8 684 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 RPAP2Q8IXW5 612 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-223ENST00000557076 DTWD2Q8NBA8 298 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 TOP1MTQ969P6 601 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 MKL1Q969V6 931 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 RIPOR3Q96MK2 946 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 CTAGE1Q96RT6 745 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 MEIS3Q99687 375 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 TRAIPQ9BWF2 469 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 LMAN2LQ9H0V9 348 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 ACAD9Q9H845 621 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 SP110Q9HB58 689 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 A1CFQ9NQ94 594 aaKnown RBP5.61□□□□□ -1.51
SCFD1-223ENST00000557076 ATP8A2Q9NTI2 1148 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 NYAP2Q9P242 653 aa5.61□□□□□ -1.51
SCFD1-223ENST00000557076 FASNP49327 2511 aaKnown RBP5.6□□□□□ -1.51
SCFD1-223ENST00000557076 CEP250Q9BV73 2442 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 GBF1Q92538 1859 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 WASH4PA8MWX3 477 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 NKRFO15226 690 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCFD1-223ENST00000557076 SEMA7AO75326 666 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 NDUFB10O96000 172 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 AMHP03971 560 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 CYP2D6P10635 497 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 CKBP12277 381 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 TFE3P19532 575 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-223ENST00000557076 ICAM3P32942 547 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 TRHRP34981 398 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-223ENST00000557076 CHRNEQ04844 493 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 COASYQ13057 564 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 TCTN1Q2MV58 587 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 SLC9C2Q5TAH2 1124 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCFD1-223ENST00000557076 C16orf86Q6ZW13 317 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 LRRC8DQ7L1W4 858 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 EEPD1Q7L9B9 569 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 PPP1R13LQ8WUF5 828 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 RNF141Q8WVD5 230 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 RMDN1Q96DB5 314 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 MSLNLQ96KJ4 702 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 NUP88Q99567 741 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-223ENST00000557076 API5Q9BZZ5 524 aaKnown RBP5.6□□□□□ -1.51
SCFD1-223ENST00000557076 SEMA4AQ9H3S1 761 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 ANTXR1Q9H6X2 564 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 SMC4Q9NTJ3 1288 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 NOB1Q9ULX3 412 aaKnown RBP5.6□□□□□ -1.51
SCFD1-223ENST00000557076 SYNPO2Q9UMS6 1093 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 A0A0G2JMZ2 1700 aa5.6□□□□□ -1.51
SCFD1-223ENST00000557076 ANKRD11Q6UB99 2663 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-223ENST00000557076 RAD50Q92878 1312 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 PNMA6EA0A0J9YXQ4 647 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 PLA2G6O60733 806 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 ATF7P17544 494 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-223ENST00000557076 PLCG1P19174 1290 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 BMPR1AP36894 532 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 RRP1P56182 461 aaKnown RBP5.59□□□□□ -1.51
SCFD1-223ENST00000557076 DUSP4Q13115 394 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 TTF1Q15361 905 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-223ENST00000557076 CLUL1Q15846 466 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 FRMD5Q7Z6J6 570 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 FBXO16Q8IX29 292 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-223ENST00000557076 MYOCDQ8IZQ8 938 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 LRRC47Q8N1G4 583 aaKnown RBP5.59□□□□□ -1.51
SCFD1-223ENST00000557076 SMRP1Q8NCR6 262 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 FAM13CQ8NE31 585 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 OR6J1Q8NGC5 347 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 CHURC1Q8WUH1 139 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 SDR42E1Q8WUS8 393 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 ARHGAP45Q92619 1136 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 C11orf84Q9BUA3 381 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-223ENST00000557076 PHF7Q9BWX1 381 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-223ENST00000557076 HOMER2Q9NSB8 354 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 DLL3Q9NYJ7 618 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 CYP39A1Q9NYL5 469 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms