RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 LRRIQ4A6NIV6 560 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 FOSBP53539 338 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 CREMQ03060 361 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 CDCA2Q69YH5 1023 aaPredicted RBP20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 LILRA6Q6PI73 481 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 PPP4R3CPQ6ZMV5 832 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 GET4Q7L5D6 327 aaPredicted RBP20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 MAEAQ7L5Y9 396 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 DTWD2Q8NBA8 298 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 NKD2Q969F2 451 aaPredicted RBP20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 PAAF1Q9BRP4 392 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 PRKD2Q9BZL6 878 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 PIDD1Q9HB75 910 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 WNT16Q9UBV4 365 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 PARP2Q9UGN5 583 aa20.27■□□□□ 0.84
VIPAS39-209ENST00000556909 SF3B1O75533 1304 aaKnown RBP eCLIP20.27■□□□□ 0.83
VIPAS39-209ENST00000556909 JAK2O60674 1132 aa20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 SPATA31C1P0DKV0 1188 aa20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 SRFP11831 508 aa20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 XRCC6P12956 609 aaKnown RBP eCLIP20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 HSP90AA2PQ14568 343 aaPredicted RBP20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 ANGPT1Q15389 498 aa20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 RTP2Q5QGT7 225 aa20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 POTEGQ6S5H5 508 aa20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 SLC44A3Q8N4M1 653 aa20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 NXPE3Q969Y0 559 aa20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 PRIMPOLQ96LW4 560 aa20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 TMEM60Q9H2L4 133 aa20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 PRMT7Q9NVM4 692 aaPredicted RBP20.26■□□□□ 0.83
VIPAS39-209ENST00000556909 MIA3Q5JRA6 1907 aa20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 DCHS1Q96JQ0 3298 aa20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 TADA2AO75478 443 aa20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 TUSC3Q13454 348 aa20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 PRSS55Q6UWB4 352 aaPredicted RBP20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 ZBTB8OSQ8IWT0 167 aa20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 MCPH1Q8NEM0 835 aa20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 HASPINQ8TF76 798 aa20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 FZD8Q9H461 694 aa20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 CA14Q9ULX7 337 aa20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 ZNF292O60281 2723 aa20.25■□□□□ 0.83
VIPAS39-209ENST00000556909 FANCMQ8IYD8 2048 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 CASTOR2A6NHX0 329 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 TTLL13PA6NNM8 815 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 PTGESO14684 152 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 ZMYND10O75800 440 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 KIF4AO95239 1232 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 LAMP2P13473 410 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 TRIM29Q14134 588 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 FAM187BQ17R55 369 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 CATSPER3Q86XQ3 398 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 PDZD7Q9H5P4 517 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 TUFT1Q9NNX1 390 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 FBXW11Q9UKB1 542 aa20.24■□□□□ 0.83
VIPAS39-209ENST00000556909 ANHXE9PGG2 379 aa20.23■□□□□ 0.83
VIPAS39-209ENST00000556909 N4BP3O15049 544 aa20.23■□□□□ 0.83
VIPAS39-209ENST00000556909 MED24O75448 989 aa20.23■□□□□ 0.83
VIPAS39-209ENST00000556909 ATP2B1P20020 1258 aa20.23■□□□□ 0.83
VIPAS39-209ENST00000556909 HTR4Q13639 388 aa20.23■□□□□ 0.83
VIPAS39-209ENST00000556909 GPR152Q8TDT2 470 aa20.23■□□□□ 0.83
VIPAS39-209ENST00000556909 BSNDQ8WZ55 320 aa20.23■□□□□ 0.83
VIPAS39-209ENST00000556909 NOTCH4Q99466 2003 aa20.23■□□□□ 0.83
VIPAS39-209ENST00000556909 TBC1D17Q9HA65 648 aa20.23■□□□□ 0.83
VIPAS39-209ENST00000556909 SNTG2Q9NY99 539 aa20.23■□□□□ 0.83
VIPAS39-209ENST00000556909 STK25O00506 426 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 RECQL4O94761 1208 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 EDN1P05305 212 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 RFX1P22670 979 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 MCM7P33993 719 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 ST3GAL1Q11201 340 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 FAM171A1Q5VUB5 890 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 PIK3R5Q8WYR1 880 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 CLSTN3Q9BQT9 956 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 TTPALQ9BTX7 342 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 CCDC113Q9H0I3 377 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 C2orf40Q9H1Z8 148 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 CXCL16Q9H2A7 254 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 NUMBLQ9Y6R0 609 aa20.22■□□□□ 0.83
VIPAS39-209ENST00000556909 PRKCBP05771 671 aa20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 FSHRP23945 695 aa20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 PRPF4BQ13523 1007 aaKnown RBP20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 NAB2Q15742 525 aa20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 PSMD5Q16401 504 aa20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 TMEM132AQ24JP5 1023 aa20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 ADSSL1Q8N142 457 aa20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 ST13P5Q8NFI4 369 aaPredicted RBP20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 LNX1Q8TBB1 728 aaPredicted RBP20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 NACC1Q96RE7 527 aa20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 POLR3CQ9BUI4 534 aaPredicted RBP20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 ARHGEF3Q9NR81 526 aa20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 EP300Q09472 2414 aaPredicted RBP20.21■□□□□ 0.83
VIPAS39-209ENST00000556909 THP07101 528 aa20.2■□□□□ 0.82
VIPAS39-209ENST00000556909 MAPK6Q16659 721 aa20.2■□□□□ 0.82
VIPAS39-209ENST00000556909 LIN9Q5TKA1 542 aa20.2■□□□□ 0.82
VIPAS39-209ENST00000556909 GRASPQ7Z6J2 395 aaPredicted RBP20.2■□□□□ 0.82
VIPAS39-209ENST00000556909 CEP57Q86XR8 500 aa20.2■□□□□ 0.82
VIPAS39-209ENST00000556909 NOSTRINQ8IVI9 506 aa20.2■□□□□ 0.82
VIPAS39-209ENST00000556909 SLC2A4RGQ9NR83 387 aa20.2■□□□□ 0.82
VIPAS39-209ENST00000556909 USP20Q9Y2K6 914 aa20.2■□□□□ 0.82
VIPAS39-209ENST00000556909 COL4A3Q01955 1670 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms