RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 CDH7Q9ULB5 785 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 GIT1Q9Y2X7 761 aa10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 MTF2Q9Y483 593 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 ZFP37Q9Y6Q3 630 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-227ENST00000556897 MYH15Q9Y2K3 1946 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 KANSL1LA0AUZ9 987 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 CPLX1O14810 134 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 B4GALT5O43286 388 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 TADA2AO75478 443 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 DEXIO95424 95 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 CREMQ03060 361 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 MBTD1Q05BQ5 628 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 MXD4Q14582 209 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 UBXN2BQ14CS0 331 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 EPHA7Q15375 998 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 MLF2Q15773 248 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 AMHR2Q16671 573 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 ZNF528Q3MIS6 628 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 VARS2Q5ST30 1063 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 GALNT17Q6IS24 598 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 OTUD6AQ7L8S5 288 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 KRT25Q7Z3Z0 450 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 CDR2LQ86X02 465 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 GPR65Q8IYL9 337 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 HACE1Q8IYU2 909 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 HS6ST3Q8IZP7 471 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 ASAP3Q8TDY4 903 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 HASPINQ8TF76 798 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 HAS1Q92839 578 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 CNTNAP3BQ96NU0 1288 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 PAAF1Q9BRP4 392 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 DDX23Q9BUQ8 820 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 BCO2Q9BYV7 579 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 CNTNAP3Q9BZ76 1288 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 ZSWIM4Q9H7M6 989 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 NCDNQ9UBB6 729 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 FBXW11Q9UKB1 542 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 POLIQ9UNA4 740 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 KCNJ14Q9UNX9 436 aa10.04□□□□□ -0.8
HNRNPC-227ENST00000556897 SF3B1O75533 1304 aaKnown RBP eCLIP10.04□□□□□ -0.86e-6■■■■■ 65.4
HNRNPC-227ENST00000556897 MIA3Q5JRA6 1907 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 CCDC194A0A1B0GVG4 234 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 FAM170BA6NMN3 283 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 CCL16O15467 120 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 LAMTOR5O43504 91 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 MARCH6O60337 910 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 CCNT1O60563 726 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 NPTXRO95502 500 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 C8AP07357 584 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 CD72P21854 359 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 PSMA5P28066 241 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 CSTF1Q05048 431 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 SPIRE1Q08AE8 756 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 GRIK3Q13003 919 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 CAPSQ13938 189 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 TOB2Q14106 344 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 TFDP1Q14186 410 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 HSP90AA2PQ14568 343 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 SLC44A4Q53GD3 710 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 PPM1LQ5SGD2 360 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 LIN9Q5TKA1 542 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 FAM171A1Q5VUB5 890 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 NCAPH2Q6IBW4 605 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 PPP4R3AQ6IN85 833 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 NEK8Q86SG6 692 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 CEP57Q86XR8 500 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 TPH2Q8IWU9 490 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 ITFG1Q8TB96 612 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 ATRIPQ8WXE1 791 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 DYDC2Q96IM9 177 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 KXD1Q9BQD3 176 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 CLSTN3Q9BQT9 956 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 LARP6Q9BRS8 491 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 TTPALQ9BTX7 342 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 PARP2Q9UGN5 583 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 FBXO4Q9UKT5 387 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 F5P12259 2224 aa10.03□□□□□ -0.8
HNRNPC-227ENST00000556897 A0A1B0GUA9 196 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 CASTOR2A6NHX0 329 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 TBX3O15119 743 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 SPTLC1O15269 473 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 ADAM12O43184 909 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 KRT37O76014 449 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 SLITRK3O94933 977 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 KIF4AO95239 1232 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 HNRNPA1P09651 372 aaKnown RBP eCLIP10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 GCFC2P16383 781 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 GLRA2P23416 452 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 ARL2P36404 184 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 PRKCQQ04759 706 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 POU5F1BQ06416 359 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 SLC27A1Q6PCB7 646 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 PIK3AP1Q6ZUJ8 805 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 MTSS1LQ765P7 747 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 LNX1Q8TBB1 728 aaPredicted RBP10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 PIK3R5Q8WYR1 880 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 HCFC1R1Q9NWW0 138 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 PCDHGA2Q9Y5H1 932 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 ARID2Q68CP9 1835 aa10.02□□□□□ -0.81
HNRNPC-227ENST00000556897 XYLBO75191 536 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms