RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 SPATA31D4Q6ZUB0 917 aa11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 CCDC149Q6ZUS6 474 aa11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 APBB1IPQ7Z5R6 666 aaPredicted RBP11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 GSTCDQ8NEC7 633 aa11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 RIN2Q8WYP3 895 aaPredicted RBP11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 CDK5RAP3Q96JB5 506 aa11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 TMX3Q96JJ7 454 aa11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 PLIN2Q99541 437 aa11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 GPR62Q9BZJ7 368 aa11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 PIDD1Q9HB75 910 aa11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 LIMD1Q9UGP4 676 aa11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 SORCS3Q9UPU3 1222 aa11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 SMC3Q9UQE7 1217 aa11.65□□□□□ -0.54
SPTLC2-205ENST00000556607 TRIP11Q15643 1979 aa11.65□□□□□ -0.55
SPTLC2-205ENST00000556607 SF3B1O75533 1304 aaKnown RBP eCLIP11.64□□□□□ -0.553e-6■■■■■ 137.9
SPTLC2-205ENST00000556607 DENND4AQ7Z401 1863 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 LILRB3O75022 631 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 HIP1RO75146 1068 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 RECQL4O94761 1208 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 ASGR2P07307 311 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 RPL17P18621 184 aaKnown RBP11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 GBP2P32456 591 aaPredicted RBP11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 PRPHP41219 470 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 YARSP54577 528 aaKnown RBP11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 OSTNP61366 133 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 DSG1Q02413 1049 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 RAD51AP2Q09MP3 1159 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 DMP1Q13316 513 aaPredicted RBP11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 HSP90AA2PQ14568 343 aaPredicted RBP11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 DCAF4L1Q3SXM0 396 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 KIAA0319Q5VV43 1072 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 EEF1DP3Q658K8 133 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 BMP8AQ7Z5Y6 402 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 GPR149Q86SP6 731 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 FBXL6Q8N531 539 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 IGSF22Q8N9C0 903 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 FEZF2Q8TBJ5 459 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 PAAF1Q9BRP4 392 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 TCHPQ9BT92 498 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 CCDC113Q9H0I3 377 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 KMT5AQ9NQR1 393 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 MYO10Q9HD67 2058 aa11.64□□□□□ -0.55
SPTLC2-205ENST00000556607 VWA3AA6NCI4 1184 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 SFI1A8K8P3 1242 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 BRD1O95696 1058 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 EDN1P05305 212 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 HARSP12081 509 aaKnown RBP11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 MATR3P43243 847 aaKnown RBP eCLIP11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 MCM2P49736 904 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 CREMQ03060 361 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 IL17AQ16552 155 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 GLRA4Q5JXX5 417 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 FAM171A1Q5VUB5 890 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 PRSS55Q6UWB4 352 aaPredicted RBP11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 C15orf39Q6ZRI6 1047 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 OTOP3Q7RTS5 596 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 ALYREFQ86V81 257 aaKnown RBP11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 RNF168Q8IYW5 571 aaPredicted RBP11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 SMG7Q92540 1137 aaKnown RBP11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 DRC1Q96MC2 740 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 KCNH6Q9H252 994 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 MFSD1Q9H3U5 465 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 USTQ9Y2C2 406 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 BDP1A6H8Y1 2624 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 ZMYM2Q9UBW7 1377 aa11.63□□□□□ -0.55
SPTLC2-205ENST00000556607 PHLPP2Q6ZVD8 1323 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 PTGESO14684 152 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 TGM5O43548 720 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 RFPL2O75678 378 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 KIF4AO95239 1232 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 NPTX2P47972 431 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 STRN3Q13033 797 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 ZNF568Q3ZCX4 644 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 NT5DC1Q5TFE4 455 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 LARP1BQ659C4 914 aaKnown RBP11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 RINT1Q6NUQ1 792 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 UBALD2Q8IYN6 164 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 ZDHHC14Q8IZN3 488 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 RASSF8Q8NHQ8 419 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 STAMQ92783 540 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 ASIC4Q96FT7 647 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 TTPALQ9BTX7 342 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 RUSC1Q9BVN2 902 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 CCDC94Q9BW85 323 aaPredicted RBP11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 MRPL4Q9BYD3 311 aaKnown RBP11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 NT5C3AQ9H0P0 336 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 CXCL16Q9H2A7 254 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 SMOC2Q9H3U7 446 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 RXFP1Q9HBX9 757 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 TOPORSQ9NS56 1045 aaPredicted RBP11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 CHST7Q9NS84 486 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 TNFSF13BQ9Y275 285 aa11.62□□□□□ -0.55
SPTLC2-205ENST00000556607 KMT2EQ8IZD2 1858 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 SLC16A4O15374 487 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 B3GAT3O94766 335 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 PDGFBP01127 241 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms