RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 BMT2Q1RMZ1 405 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 MUM1Q2TAK8 710 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 MFSD14BQ5SR56 506 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 MBNL2Q5VZF2 373 aaKnown RBP7□□□□□ -1.29
PRPF39-209ENST00000556353 PLXDC1Q8IUK5 500 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 VRK3Q8IV63 474 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 ZFP28Q8NHY6 868 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 TSPEARQ8WU66 669 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 RIN2Q8WYP3 895 aaPredicted RBP7□□□□□ -1.29
PRPF39-209ENST00000556353 FATE1Q969F0 183 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 IFT122Q9HBG6 1241 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 VTA1Q9NP79 307 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 CHST2Q9Y4C5 530 aa7□□□□□ -1.29
PRPF39-209ENST00000556353 GAGE12BA1L429 117 aa6.99□□□□□ -1.29
PRPF39-209ENST00000556353 GAGE12HA6NDE8 117 aa6.99□□□□□ -1.29
PRPF39-209ENST00000556353 ADCY6O43306 1168 aa6.99□□□□□ -1.29
PRPF39-209ENST00000556353 GCP02774 474 aa6.99□□□□□ -1.29
PRPF39-209ENST00000556353 ZSCAN20P17040 1043 aaPredicted RBP6.99□□□□□ -1.29
PRPF39-209ENST00000556353 ECHS1P30084 290 aa6.99□□□□□ -1.29
PRPF39-209ENST00000556353 PTPN7P35236 360 aa6.99□□□□□ -1.29
PRPF39-209ENST00000556353 ADRM1Q16186 407 aa6.99□□□□□ -1.29
PRPF39-209ENST00000556353 SYT12Q8IV01 421 aa6.99□□□□□ -1.29
PRPF39-209ENST00000556353 RNF169Q8NCN4 708 aa6.99□□□□□ -1.29
PRPF39-209ENST00000556353 ORAI2Q96SN7 254 aa6.99□□□□□ -1.29
PRPF39-209ENST00000556353 AKIP1Q9NQ31 210 aa6.99□□□□□ -1.29
PRPF39-209ENST00000556353 NCR1O76036 304 aa6.98□□□□□ -1.29
PRPF39-209ENST00000556353 EYA4O95677 639 aa6.98□□□□□ -1.29
PRPF39-209ENST00000556353 SPATA31D3P0C874 917 aa6.98□□□□□ -1.29
PRPF39-209ENST00000556353 CNGA1P29973 690 aa6.98□□□□□ -1.29
PRPF39-209ENST00000556353 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
PRPF39-209ENST00000556353 FAM47AQ5JRC9 791 aa6.98□□□□□ -1.29
PRPF39-209ENST00000556353 SPATA31D4Q6ZUB0 917 aa6.98□□□□□ -1.29
PRPF39-209ENST00000556353 OR7D4Q8NG98 312 aa6.98□□□□□ -1.29
PRPF39-209ENST00000556353 ACE2Q9BYF1 805 aaPredicted RBP6.98□□□□□ -1.29
PRPF39-209ENST00000556353 BCO1Q9HAY6 547 aa6.98□□□□□ -1.29
PRPF39-209ENST00000556353 C14orf119Q9NWQ9 140 aa6.98□□□□□ -1.29
PRPF39-209ENST00000556353 ZBTB21Q9ULJ3 1066 aa6.98□□□□□ -1.29
PRPF39-209ENST00000556353 CENPVL1A0A0U1RR11 272 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 PJA2O43164 708 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 B3GALT2O43825 422 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 LPXNO60711 386 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 RHOBTB3O94955 611 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 NDUFA10O95299 355 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 CLRN1P58418 232 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 MUM1L1Q5H9M0 696 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 TOR2AQ5JU69 321 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 ZNF572Q7Z3I7 529 aaPredicted RBP6.97□□□□□ -1.29
PRPF39-209ENST00000556353 KRT26Q7Z3Y9 468 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 KCNK18Q7Z418 384 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 TRMT2AQ8IZ69 625 aaKnown RBP6.97□□□□□ -1.29
PRPF39-209ENST00000556353 REPS2Q8NFH8 660 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 ZG16BQ96DA0 208 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 AHCYL2Q96HN2 611 aaKnown RBP6.97□□□□□ -1.29
PRPF39-209ENST00000556353 UHRF1Q96T88 793 aaPredicted RBP6.97□□□□□ -1.29
PRPF39-209ENST00000556353 GREM2Q9H772 168 aa6.97□□□□□ -1.29
PRPF39-209ENST00000556353 RBM12Q9NTZ6 932 aaKnown RBP6.97□□□□□ -1.29
PRPF39-209ENST00000556353 TMEM200CA6NKL6 621 aa6.96□□□□□ -1.3
PRPF39-209ENST00000556353 VIL1P09327 827 aaKnown RBP6.96□□□□□ -1.3
PRPF39-209ENST00000556353 SNRPA1P09661 255 aaKnown RBP6.96□□□□□ -1.3
PRPF39-209ENST00000556353 PER3P56645 1201 aa6.96□□□□□ -1.3
PRPF39-209ENST00000556353 ANO4Q32M45 955 aa6.96□□□□□ -1.3
PRPF39-209ENST00000556353 PDCD4Q53EL6 469 aaKnown RBP6.96□□□□□ -1.3
PRPF39-209ENST00000556353 ATXN7L2Q5T6C5 722 aaPredicted RBP6.96□□□□□ -1.3
PRPF39-209ENST00000556353 Q6ZVL8 140 aa6.96□□□□□ -1.3
PRPF39-209ENST00000556353 SPATS2Q86XZ4 545 aaKnown RBP6.96□□□□□ -1.3
PRPF39-209ENST00000556353 SLC35B2Q8TB61 432 aa6.96□□□□□ -1.3
PRPF39-209ENST00000556353 WDR66Q8TBY9 1149 aa6.96□□□□□ -1.3
PRPF39-209ENST00000556353 CYP4F11Q9HBI6 524 aa6.96□□□□□ -1.3
PRPF39-209ENST00000556353 DNAJC28Q9NX36 388 aa6.96□□□□□ -1.3
PRPF39-209ENST00000556353 SCOCQ9UIL1 159 aa6.96□□□□□ -1.3
PRPF39-209ENST00000556353 PACSIN3Q9UKS6 424 aa6.96□□□□□ -1.3
PRPF39-209ENST00000556353 CXorf49A8MYA2 514 aaPredicted RBP6.95□□□□□ -1.3
PRPF39-209ENST00000556353 ZNF185O15231 689 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 GPR39O43194 453 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 HLA-DOAP06340 250 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 BMPR1AP36894 532 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 SLC5A3P53794 718 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 SRSF2Q01130 221 aaKnown RBP6.95□□□□□ -1.3
PRPF39-209ENST00000556353 BEAN1Q3B7T3 259 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 FAM102AQ5T9C2 384 aaPredicted RBP6.95□□□□□ -1.3
PRPF39-209ENST00000556353 LHFPL2Q6ZUX7 228 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 ARHGEF19Q8IW93 802 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 TEX101Q9BY14 249 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 SERHL2Q9H4I8 314 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 ANKFY1Q9P2R3 1169 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 PRKAB1Q9Y478 270 aa6.95□□□□□ -1.3
PRPF39-209ENST00000556353 GRID2IPA4D2P6 1211 aa6.94□□□□□ -1.3
PRPF39-209ENST00000556353 PPFIA2O75334 1257 aa6.94□□□□□ -1.3
PRPF39-209ENST00000556353 PRKD3O94806 890 aa6.94□□□□□ -1.3
PRPF39-209ENST00000556353 ALOX15P16050 662 aaPredicted RBP6.94□□□□□ -1.3
PRPF39-209ENST00000556353 CHN2P52757 468 aa6.94□□□□□ -1.3
PRPF39-209ENST00000556353 NANOS3P60323 173 aaKnown RBP6.94□□□□□ -1.3
PRPF39-209ENST00000556353 TAP1Q03518 808 aa6.94□□□□□ -1.3
PRPF39-209ENST00000556353 COL10A1Q03692 680 aa6.94□□□□□ -1.3
PRPF39-209ENST00000556353 MALLQ13021 153 aa6.94□□□□□ -1.3
PRPF39-209ENST00000556353 SP140Q13342 867 aa6.94□□□□□ -1.3
PRPF39-209ENST00000556353 RRP12Q5JTH9 1297 aaKnown RBP6.94□□□□□ -1.3
PRPF39-209ENST00000556353 RNF219Q5W0B1 726 aaPredicted RBP6.94□□□□□ -1.3
PRPF39-209ENST00000556353 DNAJC10Q8IXB1 793 aa6.94□□□□□ -1.3
PRPF39-209ENST00000556353 PQLC1Q8N2U9 271 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms