RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 ADAM28Q9UKQ2 775 aa13.88□□□□□ -0.19
SNX6-207ENST00000556303 TNFSF13BQ9Y275 285 aa13.88□□□□□ -0.19
SNX6-207ENST00000556303 USTQ9Y2C2 406 aa13.88□□□□□ -0.19
SNX6-207ENST00000556303 MUC6Q6W4X9 2439 aa13.88□□□□□ -0.19
SNX6-207ENST00000556303 WDFY4Q6ZS81 3184 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 ZDBF2Q9HCK1 2354 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 HIP1RO75146 1068 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 CDC25AP30304 524 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 NPTX2P47972 431 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 SMTNP53814 917 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 PEX3P56589 373 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 ELAVL2Q12926 359 aaKnown RBP13.87□□□□□ -0.19
SNX6-207ENST00000556303 BMP8AQ7Z5Y6 402 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 CDR2LQ86X02 465 aaPredicted RBP13.87□□□□□ -0.19
SNX6-207ENST00000556303 DAW1Q8N136 415 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 CMASQ8NFW8 434 aaPredicted RBP13.87□□□□□ -0.19
SNX6-207ENST00000556303 CDK5RAP3Q96JB5 506 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 RPGRIP1Q96KN7 1286 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 MRPL4Q9BYD3 311 aaKnown RBP13.87□□□□□ -0.19
SNX6-207ENST00000556303 SNTG2Q9NY99 539 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 TECTAO75443 2155 aa13.87□□□□□ -0.19
SNX6-207ENST00000556303 VWA3AA6NCI4 1184 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 CCDC169A6NNP5 214 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 PP2D1A8MPX8 630 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 H0YCG3 227 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 TADA2AO75478 443 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 RECQL4O94761 1208 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 PAPLNO95428 1278 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 EPCAMP16422 314 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 LONP1P36776 959 aaKnown RBP13.86□□□□□ -0.19
SNX6-207ENST00000556303 SLC12A3P55017 1021 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 HSP90AA2PQ14568 343 aaPredicted RBP13.86□□□□□ -0.19
SNX6-207ENST00000556303 NT5DC1Q5TFE4 455 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 FUT10Q6P4F1 479 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 PDXDC1Q6P996 788 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 INTS4Q96HW7 963 aaKnown RBP13.86□□□□□ -0.19
SNX6-207ENST00000556303 MFSD14AQ96MC6 490 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 ACO2Q99798 780 aaKnown RBP13.86□□□□□ -0.19
SNX6-207ENST00000556303 PLEKHA4Q9H4M7 779 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 PTPRHQ9HD43 1115 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 KMT5AQ9NQR1 393 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 TOPORSQ9NS56 1045 aaPredicted RBP13.86□□□□□ -0.19
SNX6-207ENST00000556303 KLK14Q9P0G3 267 aa13.86□□□□□ -0.19
SNX6-207ENST00000556303 SF3B1O75533 1304 aaKnown RBP eCLIP13.86□□□□□ -0.196e-13■■■■■ 155.1
SNX6-207ENST00000556303 FAM86C2PA6NEL3 165 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 PTGESO14684 152 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 TEX28O15482 410 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 BRD1O95696 1058 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 GLUD1P00367 558 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 SSBP05455 408 aaKnown RBP eCLIP13.85□□□□□ -0.19
SNX6-207ENST00000556303 PLS3P13797 630 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 UBA7P41226 1012 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 ZXDAP98168 799 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 MAPK7Q13164 816 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 TMEM119Q4V9L6 283 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 RARS2Q5T160 578 aaKnown RBP13.85□□□□□ -0.19
SNX6-207ENST00000556303 TAS1R1Q7RTX1 841 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 KCNK18Q7Z418 384 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 GPR149Q86SP6 731 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 ZDHHC14Q8IZN3 488 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 CALML4Q96GE6 196 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 UROC1Q96N76 676 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 PNMA5Q96PV4 448 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 KIFC3Q9BVG8 833 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 RUSC1Q9BVN2 902 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 BACH2Q9BYV9 841 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 GPR62Q9BZJ7 368 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 POMKQ9H5K3 350 aa13.85□□□□□ -0.19
SNX6-207ENST00000556303 LARSQ9P2J5 1176 aaKnown RBP13.85□□□□□ -0.19
SNX6-207ENST00000556303 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.85□□□□□ -0.19
SNX6-207ENST00000556303 MYO10Q9HD67 2058 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 TMEM189-UBE2V1I3L0A0 370 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 EDN1P05305 212 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 PLA2G4BP0C869 781 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 MCF2P10911 925 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 LIG1P18858 919 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 PROZP22891 400 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 ABCD1P33897 745 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 GRM5P41594 1212 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 YARSP54577 528 aaKnown RBP13.84□□□□□ -0.19
SNX6-207ENST00000556303 SIGLEC14Q08ET2 396 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 STRN3Q13033 797 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 NAB2Q15742 525 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 PTPN21Q16825 1174 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 XKR4Q5GH76 650 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 EEF1DP3Q658K8 133 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 ALKAL1Q6UXT8 129 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 TRIM67Q6ZTA4 783 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 TTPALQ9BTX7 342 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 CCDC94Q9BW85 323 aaPredicted RBP13.84□□□□□ -0.19
SNX6-207ENST00000556303 APOL5Q9BWW9 433 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 POLD4Q9HCU8 107 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 SLC38A7Q9NVC3 462 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 ODF2LQ9ULJ1 636 aa13.84□□□□□ -0.19
SNX6-207ENST00000556303 ZNF318Q5VUA4 2279 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 C2CD2LO14523 706 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 ZRSR1Q15695 479 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms