RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ST13P5Q8NFI4 369 aaPredicted RBP15.94■□□□□ 0.14
CHMP4BP1-201ENST00000556017 BSNDQ8WZ55 320 aa15.94■□□□□ 0.14
CHMP4BP1-201ENST00000556017 RPP25Q9BUL9 199 aaKnown RBP15.94■□□□□ 0.14
CHMP4BP1-201ENST00000556017 POLR3FQ9H1D9 316 aaPredicted RBP15.94■□□□□ 0.14
CHMP4BP1-201ENST00000556017 FZD8Q9H461 694 aa15.94■□□□□ 0.14
CHMP4BP1-201ENST00000556017 SSX2IPQ9Y2D8 614 aa15.94■□□□□ 0.14
CHMP4BP1-201ENST00000556017 USP20Q9Y2K6 914 aa15.94■□□□□ 0.14
CHMP4BP1-201ENST00000556017 SPDYE4A6NLX3 237 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 ADAM12O43184 909 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 JAK2O60674 1132 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 BAG4O95429 457 aaKnown RBP15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 XBP1P17861 261 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 GBP2P32456 591 aaPredicted RBP15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 GRIK3Q13003 919 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 TFDP1Q14186 410 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 CALCRLQ16602 461 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 USP41Q3LFD5 358 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 PRSS55Q6UWB4 352 aaPredicted RBP15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 GTF3C6Q969F1 213 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 RTP3Q9BQQ7 232 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 CLSTN3Q9BQT9 956 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 COLEC11Q9BWP8 271 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 PRKD2Q9BZL6 878 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 PLEKHA4Q9H4M7 779 aa15.93■□□□□ 0.14
CHMP4BP1-201ENST00000556017 MIA3Q5JRA6 1907 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 PATJQ8NI35 1801 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 USO1O60763 962 aaKnown RBP15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 MED24O75448 989 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 ZMYND10O75800 440 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 SRFP11831 508 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 GLULP15104 373 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 TXKP42681 527 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 FAM187BQ17R55 369 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 CATSPER3Q86XQ3 398 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 LNX1Q8TBB1 728 aaPredicted RBP15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 RIN2Q8WYP3 895 aaPredicted RBP15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 NKD2Q969F2 451 aaPredicted RBP15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 CCDC113Q9H0I3 377 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 PDZD7Q9H5P4 517 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 ZDHHC7Q9NXF8 308 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 FBXW11Q9UKB1 542 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 FBXL21Q9UKT6 434 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 GPR179Q6PRD1 2367 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 CEP250Q9BV73 2442 aa15.92■□□□□ 0.14
CHMP4BP1-201ENST00000556017 MARCH6O60337 910 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 NEMFO60524 1076 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 KIF4AO95239 1232 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 XRCC6P12956 609 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 NTHL1P78549 312 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 HSP90AA2PQ14568 343 aaPredicted RBP15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 POTEHQ6S545 545 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 CD300LGQ6UXG3 332 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 MAEAQ7L5Y9 396 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 DIS3L2Q8IYB7 885 aaKnown RBP15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 ADSSL1Q8N142 457 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 GPR152Q8TDT2 470 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 HASPINQ8TF76 798 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 PIK3R5Q8WYR1 880 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 TBC1D17Q9HA65 648 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 CA14Q9ULX7 337 aa15.91■□□□□ 0.14
CHMP4BP1-201ENST00000556017 ANAPC15P60006 121 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 TUSC3Q13454 348 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 EEF1DP3Q658K8 133 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 STAMQ92783 540 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 FGF14Q92915 247 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 NXPE3Q969Y0 559 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 PRIMPOLQ96LW4 560 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 TRIM6Q9C030 488 aaPredicted RBP15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 SLC2A4RGQ9NR83 387 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 SNTG2Q9NY99 539 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 PARP2Q9UGN5 583 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 DPP7Q9UHL4 492 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 NUMBLQ9Y6R0 609 aa15.9■□□□□ 0.14
CHMP4BP1-201ENST00000556017 CASTOR2A6NHX0 329 aa15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 LRRIQ4A6NIV6 560 aa15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 RECQL4O94761 1208 aa15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 FOSBP53539 338 aa15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 NCBP1Q09161 790 aaKnown RBP15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 ECM1Q16610 540 aa15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 PHLDB3Q6NSJ2 640 aa15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 PARM1Q6UWI2 310 aa15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 RSPO2Q6UXX9 243 aaPredicted RBP15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 GET4Q7L5D6 327 aaPredicted RBP15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 GRASPQ7Z6J2 395 aaPredicted RBP15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 MAML2Q8IZL2 1156 aaPredicted RBP15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 WASF1Q92558 559 aa15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 PRMT7Q9NVM4 692 aaPredicted RBP15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 SF3B1O75533 1304 aaKnown RBP eCLIP15.89■□□□□ 0.13
CHMP4BP1-201ENST00000556017 LRRN2O75325 713 aa15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 NR1I2O75469 434 aa15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 TADA2AO75478 443 aa15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 DCNP07585 359 aaKnown RBP15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 FAM171A1Q5VUB5 890 aa15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 NOSTRINQ8IVI9 506 aa15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 HACE1Q8IYU2 909 aa15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 TTPALQ9BTX7 342 aa15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 POLR3CQ9BUI4 534 aaPredicted RBP15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 POLD4Q9HCU8 107 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms