RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 MATR3P43243 847 aaKnown RBP eCLIP13.83□□□□□ -0.2
SYNE2-219ENST00000555323 PMS1P54277 932 aaKnown RBP13.83□□□□□ -0.2
SYNE2-219ENST00000555323 MCCD1P59942 119 aaPredicted RBP13.83□□□□□ -0.2
SYNE2-219ENST00000555323 SLC10A6Q3KNW5 377 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 DPCR1Q3MIW9 517 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 ANKRD40Q6AI12 368 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 THNSL1Q8IYQ7 743 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 GPD1LQ8N335 351 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 GSTCDQ8NEC7 633 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 LPPQ93052 612 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 RAD9AQ99638 391 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 FUCA2Q9BTY2 467 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 CCDC94Q9BW85 323 aaPredicted RBP13.83□□□□□ -0.2
SYNE2-219ENST00000555323 TMEM117Q9H0C3 514 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 RSAD1Q9HA92 442 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 PLEKHA5Q9HAU0 1116 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 ANO10Q9NW15 660 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 HSPBP1Q9NZL4 362 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 INSL6Q9Y581 213 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 TTC26A0AVF1 554 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 BICDL2A1A5D9 508 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 MAPK13O15264 365 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 MEFVO15553 781 aaPredicted RBP13.82□□□□□ -0.2
SYNE2-219ENST00000555323 RECQL4O94761 1208 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 UPP2O95045 317 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 NR3C1P04150 777 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 AKAP5P24588 427 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 RPL13P26373 211 aaKnown RBP13.82□□□□□ -0.2
SYNE2-219ENST00000555323 FKBP3Q00688 224 aaKnown RBP13.82□□□□□ -0.2
SYNE2-219ENST00000555323 HSP90AA2PQ14568 343 aaPredicted RBP13.82□□□□□ -0.2
SYNE2-219ENST00000555323 CLLU1OSQ5K130 101 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 ZBTB41Q5SVQ8 909 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 TTI2Q6NXR4 508 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 CD302Q8IX05 232 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 TMEM192Q8IY95 271 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 XXYLT1Q8NBI6 393 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 NELFBQ8WX92 580 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 CASD1Q96PB1 797 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 MED15Q96RN5 788 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 TSPAN18Q96SJ8 248 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 PCIF1Q9H4Z3 704 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 TOPORSQ9NS56 1045 aaPredicted RBP13.82□□□□□ -0.2
SYNE2-219ENST00000555323 KANSL3Q9P2N6 904 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 PARP2Q9UGN5 583 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 DACH1Q9UI36 760 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 RWDD2AQ9UIY3 292 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 COLQQ9Y215 455 aaPredicted RBP13.82□□□□□ -0.2
SYNE2-219ENST00000555323 CEP290O15078 2479 aa13.82□□□□□ -0.2
SYNE2-219ENST00000555323 ARL5CA6NH57 179 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 FGFR1P11362 822 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 HARSP12081 509 aaKnown RBP13.81□□□□□ -0.2
SYNE2-219ENST00000555323 KCNE1P15382 129 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 TNFSF9P41273 254 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 ACOT2P49753 483 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 YARSP54577 528 aaKnown RBP13.81□□□□□ -0.2
SYNE2-219ENST00000555323 OSTNP61366 133 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 PAK1Q13153 545 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 ADAM9Q13443 819 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 ZSCAN23Q3MJ62 389 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 LRIT3Q3SXY7 679 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 SEZ6Q53EL9 994 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 GLB1LQ6UWU2 654 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 TMCO2Q7Z6W1 182 aaPredicted RBP13.81□□□□□ -0.2
SYNE2-219ENST00000555323 CMTR2Q8IYT2 770 aaKnown RBP13.81□□□□□ -0.2
SYNE2-219ENST00000555323 ZSWIM2Q8NEG5 633 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
SYNE2-219ENST00000555323 GAD1Q99259 594 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 TSG101Q99816 390 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 DUSP9Q99956 384 aaKnown RBP13.81□□□□□ -0.2
SYNE2-219ENST00000555323 FAM213AQ9BRX8 229 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 ASB7Q9H672 318 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 RPF1Q9H9Y2 349 aaKnown RBP13.81□□□□□ -0.2
SYNE2-219ENST00000555323 MIOSQ9NXC5 875 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 CNTN3Q9P232 1028 aa13.81□□□□□ -0.2
SYNE2-219ENST00000555323 TRIM49BA6NDI0 452 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 ZNF233A6NK53 670 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 NR2F2P24468 414 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 AFF1P51825 1210 aaKnown RBP13.8□□□□□ -0.2
SYNE2-219ENST00000555323 TYRO3Q06418 890 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 ENPEPQ07075 957 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 ZBTB6Q15916 424 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 ENOX2Q16206 610 aaKnown RBP13.8□□□□□ -0.2
SYNE2-219ENST00000555323 STX1AQ16623 288 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 NOMO2Q5JPE7 1267 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 FAM109BQ6ICB4 259 aaPredicted RBP13.8□□□□□ -0.2
SYNE2-219ENST00000555323 KLHL10Q6JEL2 608 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 BRSK2Q8IWQ3 736 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 ABI1Q8IZP0 508 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 RNF169Q8NCN4 708 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 HELQQ8TDG4 1101 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 SAAL1Q96ER3 474 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 SNX27Q96L92 541 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 MFSD14AQ96MC6 490 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 ZBED2Q9BTP6 218 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 MKNK1Q9BUB5 465 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 APOL6Q9BWW8 343 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 PCDHA11Q9Y5I1 949 aa13.8□□□□□ -0.2
SYNE2-219ENST00000555323 SMIM28A0A1B0GU29 152 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 SYCE3A1L190 88 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms