RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 ZFP69BQ9UJL9 534 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 KIF1AQ12756 1690 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 ZNF804BA4D1E1 1349 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 CALUO43852 315 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-217ENST00000555022 PLS3P13797 630 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 RPA3P35244 121 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-217ENST00000555022 CCNFP41002 786 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.895e-6■■■■□ 19.3
SYNE2-217ENST00000555022 DYNLT1P63172 113 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 PLCB3Q01970 1234 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 SLC47A2Q86VL8 602 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 PDCD7Q8N8D1 485 aaKnown RBP9.49□□□□□ -0.89
SYNE2-217ENST00000555022 GLIS1Q8NBF1 620 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 RFWD2Q8NHY2 731 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 STK32AQ8WU08 396 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 CKAP2Q8WWK9 683 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 SCG3Q8WXD2 468 aaKnown RBP9.49□□□□□ -0.89
SYNE2-217ENST00000555022 CNKSR1Q969H4 720 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 ZSWIM1Q9BR11 485 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 PI4K2AQ9BTU6 479 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 EDEM3Q9BZQ6 932 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 JMJD4Q9H9V9 463 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 MTUS1Q9ULD2 1270 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 GRID1Q9ULK0 1009 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 PCDHA1Q9Y5I3 950 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 KIF3CO14782 793 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 GNA14O95837 355 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 SPATA31D3P0C874 917 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 BMP3P12645 472 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 KRT10P13645 584 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 ATF7P17544 494 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 RRM1P23921 792 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 FMO5P49326 533 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 CACNA2D1P54289 1103 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 DEUP1Q05D60 604 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 SLC1A5Q15758 541 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 C11orf91Q3C1V1 193 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 SNX30Q5VWJ9 437 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 TBC1D9BQ66K14 1250 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 INTS5Q6P9B9 1019 aaKnown RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 SPATA31D4Q6ZUB0 917 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 ZNF804AQ7Z570 1209 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 DAGLBQ8NCG7 672 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 SNRNP27Q8WVK2 155 aaKnown RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 EPAS1Q99814 870 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 TOPORSQ9NS56 1045 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 PACSIN3Q9UKS6 424 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 PCDHA2Q9Y5H9 948 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 SLIT2O94813 1529 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 EMSYQ7Z589 1322 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 MEI4A8MW99 385 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 EML1O00423 815 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 LUC7L3O95232 432 aaKnown RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 LMNB1P20700 586 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 GAD2Q05329 585 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 PPP2R5CQ13362 524 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 RIPK1Q13546 671 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 THOC5Q13769 683 aaKnown RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 GALNTL6Q49A17 601 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 FOXB2Q5VYV0 432 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 CWF19L1Q69YN2 538 aaKnown RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 SLC13A5Q86YT5 568 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 ZNF564Q8TBZ8 553 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 DNAJC1Q96KC8 554 aaKnown RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 RAB3IPQ96QF0 476 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 UBE2OQ9C0C9 1292 aaKnown RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 STMN4Q9H169 189 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-217ENST00000555022 TXLNGQ9NUQ3 528 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 PCMTD2Q9NV79 361 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 CYP39A1Q9NYL5 469 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 SLC4A7Q9Y6M7 1214 aa9.48□□□□□ -0.89
SYNE2-217ENST00000555022 BAG3O95817 575 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 FGFR1P11362 822 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 BTKQ06187 659 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 ATP13A4Q4VNC1 1196 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 ZNF365Q70YC5 407 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 C1orf131Q8NDD1 294 aaKnown RBP9.47□□□□□ -0.89
SYNE2-217ENST00000555022 WDR60Q8WVS4 1066 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 NRG4Q8WWG1 115 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 CENPTQ96BT3 561 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 NAP1L3Q99457 506 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-217ENST00000555022 AGPAT1Q99943 283 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 CARD9Q9H257 536 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 ANAPC7Q9UJX3 599 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.47□□□□□ -0.89
SYNE2-217ENST00000555022 OPHN1O60890 802 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 TMEM253P0C7T8 217 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 RARGP13631 454 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 ADRA1DP25100 572 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 CHRNA3P32297 505 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 CETN2P41208 172 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 RASSF2P50749 326 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 ATXN3P54252 364 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-217ENST00000555022 CDR2Q01850 454 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 KDSRQ06136 332 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 ODR4Q5SWX8 454 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 IZUMO3Q5VZ72 239 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 SLFN11Q7Z7L1 901 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 CPA5Q8WXQ8 436 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 MAML1Q92585 1016 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms