RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 AMNQ9BXJ7 453 aa5.34□□□□□ -1.55
ATXN3-231ENST00000554994 FTOQ9C0B1 505 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATXN3-231ENST00000554994 RANBP17Q9H2T7 1088 aaKnown RBP5.34□□□□□ -1.55
ATXN3-231ENST00000554994 A1CFQ9NQ94 594 aaKnown RBP5.34□□□□□ -1.55
ATXN3-231ENST00000554994 LATS2Q9NRM7 1088 aa5.34□□□□□ -1.55
ATXN3-231ENST00000554994 ADD3Q9UEY8 706 aaKnown RBP5.34□□□□□ -1.55
ATXN3-231ENST00000554994 BRPF3Q9ULD4 1205 aa5.34□□□□□ -1.55
ATXN3-231ENST00000554994 DDX49Q9Y6V7 483 aaKnown RBP5.34□□□□□ -1.55
ATXN3-231ENST00000554994 MYO7AQ13402 2215 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 GCN1Q92616 2671 aaKnown RBP5.33□□□□□ -1.56
ATXN3-231ENST00000554994 PTPRSQ13332 1948 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 NAV2Q8IVL1 2488 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 ABCB11O95342 1321 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 PNMA6FA0A0J9YX94 578 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 ASB14A6NK59 587 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 NFIBO00712 420 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 CPLX1O14810 134 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 ATP2A1O14983 1001 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 ZBTB5O15062 677 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 SORBS3O60504 671 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 DTNBO60941 627 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 PHACTR2O75167 634 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 TBX10O75333 385 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 DDAH1O94760 285 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 PLEKHA8P1O95397 391 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 SNHG28P0DPA3 235 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 EDN3P14138 238 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 PTGS1P23219 599 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 LIFRP42702 1097 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 KCNJ6P48051 423 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 NOVP48745 357 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 METAP2P50579 478 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATXN3-231ENST00000554994 NEK4P51957 841 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 PSMC6P62333 389 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 DEFB103AP81534 67 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 DMWDQ09019 674 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 TROAPQ12815 778 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 TRAF1Q13077 416 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 CDK5R2Q13319 367 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 SMAD4Q13485 552 aaKnown RBP5.33□□□□□ -1.56
ATXN3-231ENST00000554994 ACVR2BQ13705 512 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 SEZ6L2Q6UXD5 910 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 LCNL1Q6ZST4 164 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 SEPT14Q6ZU15 432 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 ARMCX2Q7L311 632 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 HEATR3Q7Z4Q2 680 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 ZSWIM9Q86XI8 627 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 SRBD1Q8N5C6 995 aaKnown RBP5.33□□□□□ -1.56
ATXN3-231ENST00000554994 SMARCC2Q8TAQ2 1214 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 PHOSPHO2Q8TCD6 241 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 PPP1R13LQ8WUF5 828 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 MRPL38Q96DV4 380 aaKnown RBP5.33□□□□□ -1.56
ATXN3-231ENST00000554994 TAAR1Q96RJ0 339 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 LZTS2Q9BRK4 669 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 AP5M1Q9H0R1 490 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 UPF2Q9HAU5 1272 aaKnown RBP5.33□□□□□ -1.56
ATXN3-231ENST00000554994 PRDM7Q9NQW5 492 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 CYP39A1Q9NYL5 469 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 PNMA2Q9UL42 364 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 FAM184BQ9ULE4 1060 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 PCDHGC5Q9Y5F6 944 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 R4GN57 208 aa5.33□□□□□ -1.56
ATXN3-231ENST00000554994 GRIN2DO15399 1336 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 CCDC196A0A1B0GTZ2 297 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 GCOM1H8Y6P7 765 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 LINC01565O15544 149 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 SNAI1O95863 264 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 LMNAP02545 664 aaKnown RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 PFKMP08237 780 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 ADRB1P08588 477 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 POLR2MP0CAP2 368 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 ZSCAN22P10073 491 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 CST5P28325 142 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 GTF2F1P35269 517 aaKnown RBP eCLIP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 ALDH5A1P51649 535 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 ATXN1P54253 815 aaKnown RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 NAPAP54920 295 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 RPS6P62753 249 aaKnown RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 TNFAIP2Q03169 654 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 SSRP1Q08945 709 aaKnown RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 ITGA7Q13683 1181 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 KCNMB1Q16558 191 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 ECM1Q16610 540 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 CCDC144BQ3MJ40 725 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 KIAA0319Q5VV43 1072 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 APOA5Q6Q788 366 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 XKR5Q6UX68 686 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 SLC30A10Q6XR72 485 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 PCSK9Q8NBP7 692 aaKnown RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 CYP2W1Q8TAV3 490 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 CLEC4DQ8WXI8 215 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 RPGRIP1Q96KN7 1286 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 RIPOR3Q96MK2 946 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 RMDN3Q96TC7 470 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 SLC26A6Q9BXS9 759 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 NRSN2Q9GZP1 204 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 SLKQ9H2G2 1235 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 ABHD16BQ9H3Z7 469 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 RIOX1Q9H6W3 641 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 SPC25Q9HBM1 224 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms