RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 IGSF22Q8N9C0 903 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 NELFBQ8WX92 580 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 SEPT1Q8WYJ6 367 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 CASP10Q92851 521 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 GLG1Q92896 1179 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 GPRASP2Q96D09 838 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 ADAM2Q99965 735 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 TUBB2BQ9BVA1 445 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 INTS13Q9NVM9 706 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 TRMT1Q9NXH9 659 aaKnown RBP12.2□□□□□ -0.46
SHMT2-216ENST00000554975 BAHCC1Q9P281 2608 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 A0A1W2PQC6 194 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 C2orf71A6NGG8 1288 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 USP27XA6NNY8 438 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 KCNJ18B7U540 433 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 CCNT1O60563 726 aaKnown RBP12.19□□□□□ -0.46
SHMT2-216ENST00000554975 CLASP2O75122 1294 aaKnown RBP12.19□□□□□ -0.46
SHMT2-216ENST00000554975 ITGB5P18084 799 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 LAG3P18627 525 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 PBX1P40424 430 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 COPB1P53618 953 aaKnown RBP12.19□□□□□ -0.46
SHMT2-216ENST00000554975 KRT76Q01546 638 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 AP3B2Q13367 1082 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 MTMR1Q13613 665 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 KCNJ12Q14500 433 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 PUM1Q14671 1186 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHMT2-216ENST00000554975 PLCB4Q15147 1175 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 CALCRLQ16602 461 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 CES5AQ6NT32 575 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 MOXD1Q6UVY6 613 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 DCLK2Q8N568 766 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 TC2NQ8N9U0 490 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 RIN2Q8WYP3 895 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-216ENST00000554975 CDHR1Q96JP9 859 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 NECTIN4Q96NY8 510 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 SMARCAD1Q9H4L7 1026 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 RGS18Q9NS28 235 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 SAMSN1Q9NSI8 373 aaKnown RBP12.19□□□□□ -0.46
SHMT2-216ENST00000554975 PPP2R2CQ9Y2T4 447 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 PCDHA2Q9Y5H9 948 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 DOCK6Q96HP0 2047 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 MIA3Q5JRA6 1907 aa12.19□□□□□ -0.46
SHMT2-216ENST00000554975 RRN3P2A6NIE6 340 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 LRRC10BA6NIK2 292 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 LGALS16A8MUM7 142 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 M0QZ92 97 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 N4BP3O15049 544 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
SHMT2-216ENST00000554975 PLCG1P19174 1290 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 MTHFRP42898 656 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 TUBB4BP68371 445 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 ASIC1P78348 528 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 ITIH3Q06033 890 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 PDIA5Q14554 519 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 PPP4R3AQ6IN85 833 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 KIAA1841Q6NSI8 718 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 KCNT2Q6UVM3 1135 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 TMC7Q7Z402 723 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 TMTC1Q8IUR5 882 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 TMEM139Q8IV31 216 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 SIX5Q8N196 739 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 GIMAP8Q8ND71 665 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-216ENST00000554975 TBCKQ8TEA7 893 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 CASD1Q96PB1 797 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 C7orf25Q9BPX7 421 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 CCDC94Q9BW85 323 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-216ENST00000554975 NT5C3AQ9H0P0 336 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 TMEM60Q9H2L4 133 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 NGRNQ9NPE2 291 aaKnown RBP12.18□□□□□ -0.46
SHMT2-216ENST00000554975 DLL3Q9NYJ7 618 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 GINS2Q9Y248 185 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
SHMT2-216ENST00000554975 PATJQ8NI35 1801 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 PVALEFA0A1B0GWK0 134 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 DENND3A2RUS2 1198 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 NARSO43776 548 aaKnown RBP12.17□□□□□ -0.46
SHMT2-216ENST00000554975 KIF20AO95235 890 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 EOMESO95936 686 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 EPCAMP16422 314 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 CCNE1P24864 410 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 STX17P56962 302 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 NCBP1Q09161 790 aaKnown RBP12.17□□□□□ -0.46
SHMT2-216ENST00000554975 KRT31Q15323 416 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 IL17AQ16552 155 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 TSR1Q2NL82 804 aaKnown RBP12.17□□□□□ -0.46
SHMT2-216ENST00000554975 TCP11X2Q5H9J9 407 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 KRT79Q5XKE5 535 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 SLC24A5Q71RS6 500 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 APTXQ7Z2E3 356 aaKnown RBP12.17□□□□□ -0.46
SHMT2-216ENST00000554975 MRPL43Q8N983 215 aaKnown RBP12.17□□□□□ -0.46
SHMT2-216ENST00000554975 ZNF397Q8NF99 534 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-216ENST00000554975 CYP2W1Q8TAV3 490 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 AUTS2Q8WXX7 1259 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 PPP1R16BQ96T49 567 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 MXRA8Q9BRK3 442 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 NUP58Q9BVL2 599 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 TRIM9Q9C026 710 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 JADE2Q9NQC1 790 aa12.17□□□□□ -0.46
SHMT2-216ENST00000554975 ARGLU1Q9NWB6 273 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms