RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SNHG28P0DPA3 235 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 ZNF24P17028 368 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 CDK7P50613 346 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 SULT2A1Q06520 285 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 SLFN11Q7Z7L1 901 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 ADGRF4Q8IZF3 695 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 SLC35B4Q969S0 331 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 ZNF653Q96CK0 615 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 ZNF184Q99676 751 aaPredicted RBP16.71■□□□□ 0.27
SYNE3-203ENST00000554873 PITPNM3Q9BZ71 974 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 KCNK9Q9NPC2 374 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 CHMP2BQ9UQN3 213 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 KIAA0391O15091 583 aaKnown RBP16.7■□□□□ 0.26
SYNE3-203ENST00000554873 GNPATO15228 680 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 DCTN3O75935 186 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 DHX34Q14147 1143 aaKnown RBP16.7■□□□□ 0.26
SYNE3-203ENST00000554873 UBAP2Q5T6F2 1119 aaKnown RBP16.7■□□□□ 0.26
SYNE3-203ENST00000554873 TTBK2Q6IQ55 1244 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 DPY19L2P1Q6NXN4 242 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 OTUD6AQ7L8S5 288 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 ZNF571Q7Z3V5 609 aaPredicted RBP16.7■□□□□ 0.26
SYNE3-203ENST00000554873 GPBP1Q86WP2 473 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 DDX50Q9BQ39 737 aaKnown RBP16.7■□□□□ 0.26
SYNE3-203ENST00000554873 ASCC2Q9H1I8 757 aaPredicted RBP16.7■□□□□ 0.26
SYNE3-203ENST00000554873 RASAL2Q9UJF2 1139 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 TBC1D30Q9Y2I9 924 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 ZCCHC18P0CG32 403 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 ETS2P15036 469 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 AKR1B1P15121 316 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 PLCG2P16885 1265 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 SLC9A1P19634 815 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 PTPN4P29074 926 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 ZC3H3Q8IXZ2 948 aaKnown RBP16.7■□□□□ 0.26
SYNE3-203ENST00000554873 SYCE1Q8N0S2 351 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 NT5C3AQ9H0P0 336 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 PCDH18Q9HCL0 1135 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 TUBGCP4Q9UGJ1 667 aa16.7■□□□□ 0.26
SYNE3-203ENST00000554873 CAPN9O14815 690 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 E2F6O75461 281 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 CREB1P16220 341 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 CYP11B2P19099 503 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 FGFR4P22455 802 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 EPS15P42566 896 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 ZNF449Q6P9G9 518 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 PARP2Q9UGN5 583 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 hCG_2014768A0A024R1R8 64 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 POTEB3A0JP26 581 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 POTECB2RU33 542 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 GPSM2P81274 684 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 ARSHQ5FYA8 562 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 SPDYAQ5MJ70 313 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
SYNE3-203ENST00000554873 POTEBQ6S5H4 581 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 C15orf52Q6ZUT6 534 aaKnown RBP16.69■□□□□ 0.26
SYNE3-203ENST00000554873 MARK2Q7KZI7 788 aaKnown RBP16.69■□□□□ 0.26
SYNE3-203ENST00000554873 HS2ST1Q7LGA3 356 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 JAMLQ86YT9 394 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 NAT14Q8WUY8 206 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 RUNDC3BQ96NL0 473 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 NR2E1Q9Y466 385 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 MYH4Q9Y623 1939 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 POTEFA5A3E0 1075 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 POTEIP0CG38 1075 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 POTEJP0CG39 1038 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 RARGP13631 454 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 GJA8P48165 433 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 ZNF543Q08ER8 600 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 TMED1Q13445 227 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 WDR72Q3MJ13 1102 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 DAB2IPQ5VWQ8 1189 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 POTEEQ6S8J3 1075 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 ARHGEF18Q6ZSZ5 1173 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 NME8Q8N427 588 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 ARHGEF1Q92888 912 aaKnown RBP16.69■□□□□ 0.26
SYNE3-203ENST00000554873 HES6Q96HZ4 224 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 CLMNQ96JQ2 1002 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 SERPINB12Q96P63 405 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 ZHX3Q9H4I2 956 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 GRHL1Q9NZI5 618 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 STARD13Q9Y3M8 1113 aa16.69■□□□□ 0.26
SYNE3-203ENST00000554873 KDM3AQ9Y4C1 1321 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.68■□□□□ 0.26
SYNE3-203ENST00000554873 HNRNPCL1O60812 293 aaKnown RBP16.68■□□□□ 0.26
SYNE3-203ENST00000554873 GH1P01241 217 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 TAC1P20366 129 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 SLC16A2P36021 539 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 P3H1Q32P28 736 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 DPP8Q6V1X1 898 aaPredicted RBP16.68■□□□□ 0.26
SYNE3-203ENST00000554873 FAM47EQ6ZV65 393 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 NT5DC3Q86UY8 548 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 SPATA24Q86W54 205 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 WDR60Q8WVS4 1066 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 GLG1Q92896 1179 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 CATSPER2Q96P56 530 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 CRAMP1Q96RY5 1269 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 METTL5Q9NRN9 209 aaKnown RBP16.68■□□□□ 0.26
SYNE3-203ENST00000554873 ZNF212Q9UDV6 495 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 HDAC9Q9UKV0 1011 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 RAD21O60216 631 aa16.68■□□□□ 0.26
SYNE3-203ENST00000554873 KRT36O76013 467 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms