RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 SSBP05455 408 aaKnown RBP eCLIP6.46□□□□□ -1.38
ATXN3-230ENST00000554673 ADRB2P07550 413 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 IQCF3P0C7M6 154 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 CCNE1P24864 410 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 ADSSP30520 456 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 GCLCP48506 637 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-230ENST00000554673 MYL5Q02045 173 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 ORC1Q13415 861 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 NR1I3Q14994 352 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 STXBP2Q15833 593 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 TMEM266Q2M3C6 531 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 WDR44Q5JSH3 913 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 FAM26FQ5R3K3 315 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 ZBTB41Q5SVQ8 909 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 SPATA1Q5VX52 437 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 SV2BQ7L1I2 683 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 MAEAQ7L5Y9 396 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 TRMT1LQ7Z2T5 733 aaKnown RBP6.46□□□□□ -1.38
ATXN3-230ENST00000554673 PLEKHH3Q7Z736 793 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 NELFCDQ8IXH7 590 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 ETFBKMTQ8IXQ9 262 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 CEP57L1Q8IYX8 460 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 ABRAQ8N0Z2 381 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 PGBD3Q8N328 593 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 MLKLQ8NB16 471 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 SMC1BQ8NDV3 1235 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 AFG1LQ8WV93 481 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 EDEM1Q92611 657 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 P2RX5Q93086 422 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 ABHD17AQ96GS6 310 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 HHIPL1Q96JK4 782 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.46□□□□□ -1.38
ATXN3-230ENST00000554673 TTYH3Q9C0H2 523 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 MAF1Q9H063 256 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 DHX33Q9H6R0 707 aaKnown RBP6.46□□□□□ -1.38
ATXN3-230ENST00000554673 MAGEF1Q9HAY2 307 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 JPH1Q9HDC5 661 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-230ENST00000554673 DMAC2Q9NW81 257 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 TAB2Q9NYJ8 693 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 SLC9A2Q9UBY0 812 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 FBXO40Q9UH90 709 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 LIMA1Q9UHB6 759 aaKnown RBP6.46□□□□□ -1.38
ATXN3-230ENST00000554673 RWDD2AQ9UIY3 292 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 DBR1Q9UK59 544 aaKnown RBP6.46□□□□□ -1.38
ATXN3-230ENST00000554673 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.46□□□□□ -1.38
ATXN3-230ENST00000554673 CEP350Q5VT06 3117 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 GRIN2DO15399 1336 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 PTPRJQ12913 1337 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 KDM3AQ9Y4C1 1321 aa6.46□□□□□ -1.38
ATXN3-230ENST00000554673 LRRC10BA6NIK2 292 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 A6NJY4 79 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 USP27XA6NNY8 438 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 WDR64B1ANS9 1081 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 C2CD2LO14523 706 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 CA12O43570 354 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 FAM189A1O60320 539 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 USO1O60763 962 aaKnown RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 NOL4O94818 638 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 ZNF286BP0CG31 522 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 CYBAP13498 195 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 HOXB4P17483 251 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 GLRA2P23416 452 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 EIF4BP23588 611 aaKnown RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 YWHABP31946 246 aaKnown RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 ARL2P36404 184 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 QARSP47897 775 aaKnown RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 COPB1P53618 953 aaKnown RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 NCKAP1LP55160 1127 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 ADAM17P78536 824 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 ZNF200P98182 395 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 PRKCZQ05513 592 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 TRAF1Q13077 416 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 TBCELQ5QJ74 424 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 ZNF720Q7Z2F6 126 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 VSTM4Q8IW00 320 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 GUF1Q8N442 669 aaKnown RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 SPC24Q8NBT2 197 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 TMEM161BQ8NDZ6 487 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 AFAP1L1Q8TED9 768 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 CALML4Q96GE6 196 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 MRFAP1L1Q96HT8 127 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 ZNF668Q96K58 619 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 PARK7Q99497 189 aaKnown RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 NAP1L4Q99733 375 aaKnown RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 NIFKQ9BYG3 293 aaKnown RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 CCDC113Q9H0I3 377 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 MINDY3Q9H8M7 445 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 ZCCHC17Q9NP64 241 aaKnown RBP6.45□□□□□ -1.38
ATXN3-230ENST00000554673 SIX2Q9NPC8 291 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 TBC1D22BQ9NU19 505 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 KLHL42Q9P2K6 505 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 GGT7Q9UJ14 662 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 SIK3Q9Y2K2 1263 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 PCDHA10Q9Y5I2 948 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 MYH10P35580 1976 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 TSC2P49815 1807 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 EMSYQ7Z589 1322 aa6.45□□□□□ -1.38
ATXN3-230ENST00000554673 HAS3O00219 553 aa6.44□□□□□ -1.38
ATXN3-230ENST00000554673 AKAP3O75969 853 aa6.44□□□□□ -1.38
ATXN3-230ENST00000554673 C22orf31O95567 290 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms