RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 CALCRLQ16602 461 aa26.84■■□□□ 1.89
FOXA1-204ENST00000554607 ARHGEF3Q9NR81 526 aa26.84■■□□□ 1.89
FOXA1-204ENST00000554607 KLK14Q9P0G3 267 aa26.84■■□□□ 1.89
FOXA1-204ENST00000554607 PRIMPOLQ96LW4 560 aa26.83■■□□□ 1.89
FOXA1-204ENST00000554607 POLR3FQ9H1D9 316 aaPredicted RBP26.83■■□□□ 1.89
FOXA1-204ENST00000554607 TTC12Q9H892 705 aaPredicted RBP26.83■■□□□ 1.89
FOXA1-204ENST00000554607 PRMT7Q9NVM4 692 aaPredicted RBP26.83■■□□□ 1.89
FOXA1-204ENST00000554607 RPL17P18621 184 aaKnown RBP26.82■■□□□ 1.88
FOXA1-204ENST00000554607 FSHRP23945 695 aa26.82■■□□□ 1.88
FOXA1-204ENST00000554607 NR5A1Q13285 461 aa26.82■■□□□ 1.88
FOXA1-204ENST00000554607 TUSC3Q13454 348 aa26.82■■□□□ 1.88
FOXA1-204ENST00000554607 DCLRE1AQ6PJP8 1040 aa26.82■■□□□ 1.88
FOXA1-204ENST00000554607 ZC3H14Q6PJT7 736 aaKnown RBP26.82■■□□□ 1.88
FOXA1-204ENST00000554607 CDR2LQ86X02 465 aaPredicted RBP26.82■■□□□ 1.88
FOXA1-204ENST00000554607 SHDQ96IW2 340 aa26.82■■□□□ 1.88
FOXA1-204ENST00000554607 TPCN1Q9ULQ1 816 aa26.82■■□□□ 1.88
FOXA1-204ENST00000554607 NUMBLQ9Y6R0 609 aa26.82■■□□□ 1.88
FOXA1-204ENST00000554607 FAM205CA6NFA0 338 aa26.81■■□□□ 1.88
FOXA1-204ENST00000554607 HNRNPA1P09651 372 aaKnown RBP eCLIP26.81■■□□□ 1.88
FOXA1-204ENST00000554607 SPECC1Q5M775 1068 aa26.81■■□□□ 1.88
FOXA1-204ENST00000554607 RTP2Q5QGT7 225 aa26.81■■□□□ 1.88
FOXA1-204ENST00000554607 LIN9Q5TKA1 542 aa26.81■■□□□ 1.88
FOXA1-204ENST00000554607 PPP4R3CPQ6ZMV5 832 aa26.81■■□□□ 1.88
FOXA1-204ENST00000554607 RABGGTAQ92696 567 aa26.81■■□□□ 1.88
FOXA1-204ENST00000554607 TNFRSF25Q93038 417 aa26.81■■□□□ 1.88
FOXA1-204ENST00000554607 TTPALQ9BTX7 342 aa26.81■■□□□ 1.88
FOXA1-204ENST00000554607 FBXW11Q9UKB1 542 aa26.81■■□□□ 1.88
FOXA1-204ENST00000554607 LRRIQ4A6NIV6 560 aa26.8■■□□□ 1.88
FOXA1-204ENST00000554607 DCNP07585 359 aaKnown RBP26.8■■□□□ 1.88
FOXA1-204ENST00000554607 TXKP42681 527 aa26.8■■□□□ 1.88
FOXA1-204ENST00000554607 PDXDC1Q6P996 788 aa26.8■■□□□ 1.88
FOXA1-204ENST00000554607 PRSS55Q6UWB4 352 aaPredicted RBP26.8■■□□□ 1.88
FOXA1-204ENST00000554607 ZBTB8OSQ8IWT0 167 aa26.8■■□□□ 1.88
FOXA1-204ENST00000554607 PIGOQ8TEQ8 1089 aa26.8■■□□□ 1.88
FOXA1-204ENST00000554607 NEMFO60524 1076 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 USO1O60763 962 aaKnown RBP26.79■■□□□ 1.88
FOXA1-204ENST00000554607 CTDNEP1O95476 244 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 ELAVL2Q12926 359 aaKnown RBP26.79■■□□□ 1.88
FOXA1-204ENST00000554607 ANKRD1Q15327 319 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 PPM1LQ5SGD2 360 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 FAM171A1Q5VUB5 890 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 POTEGQ6S5H5 508 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 GRASPQ7Z6J2 395 aaPredicted RBP26.79■■□□□ 1.88
FOXA1-204ENST00000554607 C1orf210Q8IVY1 113 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 MCPH1Q8NEM0 835 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 PIK3R5Q8WYR1 880 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 DLGAP2Q9P1A6 1054 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 CDH7Q9ULB5 785 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 R4GN57 208 aa26.79■■□□□ 1.88
FOXA1-204ENST00000554607 EP300Q09472 2414 aaPredicted RBP26.78■■□□□ 1.88
FOXA1-204ENST00000554607 THP07101 528 aa26.78■■□□□ 1.88
FOXA1-204ENST00000554607 HOXA9P31269 272 aa26.78■■□□□ 1.88
FOXA1-204ENST00000554607 STARD6P59095 220 aa26.78■■□□□ 1.88
FOXA1-204ENST00000554607 PSMD5Q16401 504 aa26.78■■□□□ 1.88
FOXA1-204ENST00000554607 FAM187BQ17R55 369 aa26.78■■□□□ 1.88
FOXA1-204ENST00000554607 MTSS1LQ765P7 747 aa26.78■■□□□ 1.88
FOXA1-204ENST00000554607 CEP57Q86XR8 500 aa26.78■■□□□ 1.88
FOXA1-204ENST00000554607 LNX1Q8TBB1 728 aaPredicted RBP26.78■■□□□ 1.88
FOXA1-204ENST00000554607 CLSTN3Q9BQT9 956 aa26.78■■□□□ 1.88
FOXA1-204ENST00000554607 PAAF1Q9BRP4 392 aa26.78■■□□□ 1.88
FOXA1-204ENST00000554607 C2orf40Q9H1Z8 148 aa26.78■■□□□ 1.88
FOXA1-204ENST00000554607 FZD8Q9H461 694 aa26.78■■□□□ 1.88
FOXA1-204ENST00000554607 DAXXQ9UER7 740 aaPredicted RBP26.78■■□□□ 1.88
FOXA1-204ENST00000554607 WDR87Q6ZQQ6 2873 aa26.77■■□□□ 1.88
FOXA1-204ENST00000554607 N4BP3O15049 544 aa26.77■■□□□ 1.88
FOXA1-204ENST00000554607 XYLBO75191 536 aa26.77■■□□□ 1.88
FOXA1-204ENST00000554607 CDCA2Q69YH5 1023 aaPredicted RBP26.77■■□□□ 1.88
FOXA1-204ENST00000554607 PJA1Q8NG27 643 aa26.77■■□□□ 1.88
FOXA1-204ENST00000554607 MTMR9Q96QG7 549 aa26.77■■□□□ 1.88
FOXA1-204ENST00000554607 ZNF292O60281 2723 aa26.77■■□□□ 1.88
FOXA1-204ENST00000554607 DCHS1Q96JQ0 3298 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 CASTOR2A6NHX0 329 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 DTNBO60941 627 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 C8AP07357 584 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 SP9P0CG40 484 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 FDPSP14324 419 aaKnown RBP26.76■■□□□ 1.87
FOXA1-204ENST00000554607 ATP2B1P20020 1258 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 GPC5P78333 572 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 TMEM132AQ24JP5 1023 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 MAEAQ7L5Y9 396 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 HASPINQ8TF76 798 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 ADPGKQ9BRR6 497 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 TUFT1Q9NNX1 390 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 GPRC5CQ9NQ84 441 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 CACNG4Q9UBN1 327 aa26.76■■□□□ 1.87
FOXA1-204ENST00000554607 A0A087WWV3 80 aa26.75■■□□□ 1.87
FOXA1-204ENST00000554607 KIF4AO95239 1232 aa26.75■■□□□ 1.87
FOXA1-204ENST00000554607 PARM1Q6UWI2 310 aa26.75■■□□□ 1.87
FOXA1-204ENST00000554607 FGF14Q92915 247 aa26.75■■□□□ 1.87
FOXA1-204ENST00000554607 RPP25Q9BUL9 199 aaKnown RBP26.75■■□□□ 1.87
FOXA1-204ENST00000554607 SNTG2Q9NY99 539 aa26.75■■□□□ 1.87
FOXA1-204ENST00000554607 BTBD18B2RXH4 712 aa26.74■■□□□ 1.87
FOXA1-204ENST00000554607 PTGESO14684 152 aa26.74■■□□□ 1.87
FOXA1-204ENST00000554607 POU2F2P09086 479 aa26.74■■□□□ 1.87
FOXA1-204ENST00000554607 PRPF4BQ13523 1007 aaKnown RBP26.74■■□□□ 1.87
FOXA1-204ENST00000554607 MAPK6Q16659 721 aa26.74■■□□□ 1.87
FOXA1-204ENST00000554607 UVSSAQ2YD98 709 aa26.74■■□□□ 1.87
FOXA1-204ENST00000554607 RTL10Q7L3V2 364 aa26.74■■□□□ 1.87
FOXA1-204ENST00000554607 FGF13Q92913 245 aa26.74■■□□□ 1.87
FOXA1-204ENST00000554607 BORCS6Q96GS4 357 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms