RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 EEF1DP3Q658K8 133 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 GPR65Q8IYL9 337 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 RNF168Q8IYW5 571 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-213ENST00000554508 NECTIN4Q96NY8 510 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 PLIN2Q99541 437 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 ACO2Q99798 780 aaKnown RBP9.59□□□□□ -0.87
ACTN1-213ENST00000554508 KIFC3Q9BVG8 833 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 MRPL4Q9BYD3 311 aaKnown RBP9.59□□□□□ -0.87
ACTN1-213ENST00000554508 ADAM7Q9H2U9 754 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 LARSQ9P2J5 1176 aaKnown RBP9.59□□□□□ -0.87
ACTN1-213ENST00000554508 ARHGAP28Q9P2N2 729 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 DPP7Q9UHL4 492 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 ADAM28Q9UKQ2 775 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 PLXNA3P51805 1871 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 PDCD11Q14690 1871 aaKnown RBP9.59□□□□□ -0.87
ACTN1-213ENST00000554508 C2orf16Q68DN1 1984 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 MYH15Q9Y2K3 1946 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 SFI1A8K8P3 1242 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 H0YCG3 227 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 RECQL4O94761 1208 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 ADH1AP07327 375 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 CNPP09543 421 aaKnown RBP9.58□□□□□ -0.88
ACTN1-213ENST00000554508 PLS3P13797 630 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 SCP2P22307 547 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 MTHFRP42898 656 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 GLUD2P49448 558 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 CLCN4P51793 760 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 DSG1Q02413 1049 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 CREMQ03060 361 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 STRN3Q13033 797 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 MAPK7Q13164 816 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 HSP90AA2PQ14568 343 aaPredicted RBP9.58□□□□□ -0.88
ACTN1-213ENST00000554508 HERC4Q5GLZ8 1057 aaPredicted RBP9.58□□□□□ -0.88
ACTN1-213ENST00000554508 KIAA0319Q5VV43 1072 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 KIAA1841Q6NSI8 718 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 FUT10Q6P4F1 479 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 ELMSAN1Q6PJG2 1045 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 RNF135Q8IUD6 432 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 KCNN1Q92952 543 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 RIPOR3Q96MK2 946 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 LRFN3Q9BTN0 628 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 ZSCAN16Q9H4T2 348 aaPredicted RBP9.58□□□□□ -0.88
ACTN1-213ENST00000554508 RXFP1Q9HBX9 757 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 PTPRHQ9HD43 1115 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.58□□□□□ -0.88
ACTN1-213ENST00000554508 CHST7Q9NS84 486 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 ODF2LQ9ULJ1 636 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 USP20Q9Y2K6 914 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 GDAQ9Y2T3 454 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 NR2E1Q9Y466 385 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 VWA8A3KMH1 1905 aa9.58□□□□□ -0.88
ACTN1-213ENST00000554508 C2CD2LO14523 706 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 PTGESO14684 152 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 SLC16A4O15374 487 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 BRD1O95696 1058 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 MCF2P10911 925 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 PDIA4P13667 645 aaKnown RBP9.57□□□□□ -0.88
ACTN1-213ENST00000554508 EPCAMP16422 314 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 COL9A1P20849 921 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 PROZP22891 400 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 ABCD1P33897 745 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 ANP32AP39687 249 aaKnown RBP9.57□□□□□ -0.88
ACTN1-213ENST00000554508 GRM5P41594 1212 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 YARSP54577 528 aaKnown RBP9.57□□□□□ -0.88
ACTN1-213ENST00000554508 RAD51AP2Q09MP3 1159 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 ELAVL2Q12926 359 aaKnown RBP9.57□□□□□ -0.88
ACTN1-213ENST00000554508 RESTQ13127 1097 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 NAB2Q15742 525 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 ZNF568Q3ZCX4 644 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 ARSHQ5FYA8 562 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 ATAT1Q5SQI0 421 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 ALKAL1Q6UXT8 129 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 TAS1R3Q7RTX0 852 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 TAS1R1Q7RTX1 841 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 TMEM161BQ8NDZ6 487 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 RASSF8Q8NHQ8 419 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 HDAC7Q8WUI4 952 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 RPGRIP1Q96KN7 1286 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 FBXL18Q96ME1 805 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 UROC1Q96N76 676 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 TCHPQ9BT92 498 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 CCDC94Q9BW85 323 aaPredicted RBP9.57□□□□□ -0.88
ACTN1-213ENST00000554508 TARS2Q9BW92 718 aaKnown RBP9.57□□□□□ -0.88
ACTN1-213ENST00000554508 APOL5Q9BWW9 433 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 CCSER1Q9C0I3 900 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 CDT1Q9H211 546 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 SFXN1Q9H9B4 322 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 TOPORSQ9NS56 1045 aaPredicted RBP9.57□□□□□ -0.88
ACTN1-213ENST00000554508 FNIP2Q9P278 1114 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 SRPRBQ9Y5M8 271 aaKnown RBP9.57□□□□□ -0.88
ACTN1-213ENST00000554508 MORC2Q9Y6X9 1032 aaPredicted RBP9.57□□□□□ -0.88
ACTN1-213ENST00000554508 DENND4AQ7Z401 1863 aa9.57□□□□□ -0.88
ACTN1-213ENST00000554508 SF3B1O75533 1304 aaKnown RBP eCLIP9.56□□□□□ -0.882e-7■■■■■ 159.4
ACTN1-213ENST00000554508 TECTAO75443 2155 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 CASTOR2A6NHX0 329 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 SPDYE4A6NLX3 237 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 PRR33A8MZF0 331 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 F8W810 466 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 TMEM189-UBE2V1I3L0A0 370 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 TEX28O15482 410 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms