RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 NRP1O14786 923 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 EFEMP2O95967 443 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 ALDH2P05091 517 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 SRGAP2BP0DMP2 458 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 CTSAP10619 480 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 PLS3P13797 630 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 IL9P15248 144 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 PLCG1P19174 1290 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 SCP2P22307 547 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 AKAP5P24588 427 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 NASPP49321 788 aaPredicted RBP8.28□□□□□ -1.08
LINC00640-201ENST00000554409 NDUFV1P49821 464 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 SCNN1GP51170 649 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 SMAD4Q13485 552 aaKnown RBP8.28□□□□□ -1.08
LINC00640-201ENST00000554409 ZRSR1Q15695 479 aaKnown RBP8.28□□□□□ -1.08
LINC00640-201ENST00000554409 SMAD2Q15796 467 aaKnown RBP8.28□□□□□ -1.08
LINC00640-201ENST00000554409 ARSHQ5FYA8 562 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 NT5DC1Q5TFE4 455 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 ATF7IP2Q5U623 682 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 FAM173BQ6P4H8 233 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 EP400NLQ6ZTU2 488 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 TAS1R3Q7RTX0 852 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 TMC7Q7Z402 723 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 RBM23Q86U06 439 aaKnown RBP8.28□□□□□ -1.08
LINC00640-201ENST00000554409 FAM178BQ8IXR5 827 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 RNF168Q8IYW5 571 aaPredicted RBP8.28□□□□□ -1.08
LINC00640-201ENST00000554409 VPS52Q8N1B4 723 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 MRPL43Q8N983 215 aaKnown RBP8.28□□□□□ -1.08
LINC00640-201ENST00000554409 SMRP1Q8NCR6 262 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 VN1R2Q8NFZ6 395 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 RAD54LQ92698 747 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 PLIN2Q99541 437 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 ACO2Q99798 780 aaKnown RBP8.28□□□□□ -1.08
LINC00640-201ENST00000554409 EPAS1Q99814 870 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 VN1R3Q9BXE9 311 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 IGFLR1Q9H665 355 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 PTPRHQ9HD43 1115 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 KMT5AQ9NQR1 393 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 BLOC1S4Q9NUP1 217 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 MIOSQ9NXC5 875 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 PRKAG3Q9UGI9 489 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 CD207Q9UJ71 328 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 FAN1Q9Y2M0 1017 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 CITO14578 2027 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 H0YCG3 227 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 PER2O15055 1255 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 SLC16A4O15374 487 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 MBTPS2O43462 519 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 NR1I2O75469 434 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 BRD1O95696 1058 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 SOD2P04179 222 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 SSBP05455 408 aaKnown RBP eCLIP8.27□□□□□ -1.09
LINC00640-201ENST00000554409 LIG1P18858 919 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 PROZP22891 400 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 ZNF131P52739 623 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 SMTNP53814 917 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 NCKAP1LP55160 1127 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 SLC39A14Q15043 492 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 KARSQ15046 597 aaKnown RBP8.27□□□□□ -1.09
LINC00640-201ENST00000554409 TMEM132AQ24JP5 1023 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 EEF1DP3Q658K8 133 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 TMEM161BQ8NDZ6 487 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 LARP4BQ92615 738 aaKnown RBP8.27□□□□□ -1.09
LINC00640-201ENST00000554409 NECAB3Q96P71 396 aaPredicted RBP8.27□□□□□ -1.09
LINC00640-201ENST00000554409 USP28Q96RU2 1077 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 RPS6KC1Q96S38 1066 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 REEP2Q9BRK0 252 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 HERC2P3Q9BVR0 1158 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 APOL6Q9BWW8 343 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 MRPL4Q9BYD3 311 aaKnown RBP8.27□□□□□ -1.09
LINC00640-201ENST00000554409 MARCH5Q9NX47 278 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 SNTG2Q9NY99 539 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 LARSQ9P2J5 1176 aaKnown RBP8.27□□□□□ -1.09
LINC00640-201ENST00000554409 STK17AQ9UEE5 414 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 CCDC39Q9UFE4 941 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 PARP2Q9UGN5 583 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 BARX2Q9UMQ3 279 aaPredicted RBP8.27□□□□□ -1.09
LINC00640-201ENST00000554409 TRIP11Q15643 1979 aa8.27□□□□□ -1.09
LINC00640-201ENST00000554409 PLXNA3P51805 1871 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 NPHP3-ACAD11A0A0J9YXS1 232 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 SFI1A8K8P3 1242 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 ABLIM1O14639 778 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 PTGESO14684 152 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 LILRB3O75022 631 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 CLASP2O75122 1294 aaKnown RBP8.26□□□□□ -1.09
LINC00640-201ENST00000554409 PPP6R2O75170 966 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 RECQL4O94761 1208 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 CXCL14O95715 111 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 MAPTP10636 758 aaKnown RBP8.26□□□□□ -1.09
LINC00640-201ENST00000554409 MCF2P10911 925 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 HOXB8P17481 243 aaPredicted RBP8.26□□□□□ -1.09
LINC00640-201ENST00000554409 MARCKSP29966 332 aaPredicted RBP8.26□□□□□ -1.09
LINC00640-201ENST00000554409 DDIT3P35638 169 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 TXLNAP40222 546 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 GRM5P41594 1212 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 OR1G1P47890 313 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 LSM11P83369 360 aaKnown RBP eCLIP8.26□□□□□ -1.09
LINC00640-201ENST00000554409 RAD51AP2Q09MP3 1159 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 STRN3Q13033 797 aa8.26□□□□□ -1.09
LINC00640-201ENST00000554409 TUSC3Q13454 348 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms