RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 MTCL1Q9Y4B5 1905 aaKnown RBP11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 PDCD11Q14690 1871 aaKnown RBP11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 CFAP54Q96N23 3096 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 PI4K2BG5E9Z4 385 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 K7ERI5 159 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 SNPHO15079 494 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 CLASP2O75122 1294 aaKnown RBP11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 HIP1RO75146 1068 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 CXCL14O95715 111 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 EFEMP2O95967 443 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 SOD2P04179 222 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 SSTR3P32745 418 aaPredicted RBP11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 LONP1P36776 959 aaKnown RBP11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 NPTX2P47972 431 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 SCNN1GP51170 649 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 MAPK7Q13164 816 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 PTPN14Q15678 1187 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 TPRNQ4KMQ1 711 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 TMEM119Q4V9L6 283 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 PPFIBP1Q86W92 1011 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 CDR2LQ86X02 465 aaPredicted RBP11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 RNF168Q8IYW5 571 aaPredicted RBP11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 SYT2Q8N9I0 419 aaPredicted RBP11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 SUSD6Q92537 303 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 CDK5RAP3Q96JB5 506 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 PNMA5Q96PV4 448 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 RPS6KC1Q96S38 1066 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 NTPCRQ9BSD7 190 aaKnown RBP11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 RUSC1Q9BVN2 902 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 APOL6Q9BWW8 343 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 S1PR5Q9H228 398 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 TMEM134Q9H6X4 195 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 DZANK1Q9NVP4 752 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 MARCH5Q9NX47 278 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 MIOSQ9NXC5 875 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 ARHGAP28Q9P2N2 729 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 SSX2IPQ9Y2D8 614 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 HCFC2Q9Y5Z7 792 aa11.46□□□□□ -0.57
PTCD2P1-201ENST00000554393 PLXNA3P51805 1871 aa11.46□□□□□ -0.58
PTCD2P1-201ENST00000554393 DENND4AQ7Z401 1863 aa11.46□□□□□ -0.58
PTCD2P1-201ENST00000554393 VPS37CA5D8V6 355 aaPredicted RBP11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 K7ELQ4 463 aaPredicted RBP11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 EDN1P05305 212 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 ALADP13716 330 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 AKAP5P24588 427 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 UBA7P41226 1012 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 OR1G1P47890 313 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 SLC12A3P55017 1021 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 PEX3P56589 373 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 RBM10P98175 930 aaKnown RBP11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 ITIH3Q06033 890 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 TMEM132AQ24JP5 1023 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 ATF7IP2Q5U623 682 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 SYCE2Q6PIF2 218 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 CABP7Q86V35 215 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 GPR65Q8IYL9 337 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 TMEM87AQ8NBN3 555 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 SPIRE2Q8WWL2 714 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 KCNN1Q92952 543 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 CALML4Q96GE6 196 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 KIFC3Q9BVG8 833 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 HERC2P3Q9BVR0 1158 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 COLEC11Q9BWP8 271 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 PHF7Q9BWX1 381 aaPredicted RBP11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 EMILIN2Q9BXX0 1053 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 MRPL17Q9NRX2 175 aaKnown RBP11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 PARP2Q9UGN5 583 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 TNFSF13BQ9Y275 285 aa11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 MORC2Q9Y6X9 1032 aaPredicted RBP11.45□□□□□ -0.58
PTCD2P1-201ENST00000554393 CCDC169A6NNP5 214 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 LOC730098B7Z3J9 87 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 LILRB3O75022 631 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 RECQL4O94761 1208 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 C1RP00736 705 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 URODP06132 367 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 PLA2G4BP0C869 781 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 PLS3P13797 630 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 SYT1P21579 422 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 SCP2P22307 547 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 CA8P35219 290 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 TUSC3Q13454 348 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 CBX2Q14781 532 aaPredicted RBP11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 SF3A1Q15459 793 aaKnown RBP11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 ZRSR1Q15695 479 aaKnown RBP11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 NT5DC1Q5TFE4 455 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 EEF1DP3Q658K8 133 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 LLGL2Q6P1M3 1020 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 SLC22A17Q8WUG5 538 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 AUTS2Q8WXX7 1259 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 KHSRPQ92945 711 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 SNX21Q969T3 373 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 NECTIN4Q96NY8 510 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 MRPL4Q9BYD3 311 aaKnown RBP11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 KMT5AQ9NQR1 393 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 ODF2LQ9ULJ1 636 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 PRG3Q9Y2Y8 225 aaPredicted RBP11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 C2orf16Q68DN1 1984 aa11.44□□□□□ -0.58
PTCD2P1-201ENST00000554393 VWA8A3KMH1 1905 aa11.43□□□□□ -0.58
PTCD2P1-201ENST00000554393 H0YCG3 227 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms