RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 FNIP2Q9P278 1114 aa9.06□□□□□ -0.96
ACTN1-212ENST00000554158 ADAM28Q9UKQ2 775 aa9.06□□□□□ -0.96
ACTN1-212ENST00000554158 NUMBLQ9Y6R0 609 aa9.06□□□□□ -0.96
ACTN1-212ENST00000554158 CACNA1BQ00975 2339 aa9.06□□□□□ -0.96
ACTN1-212ENST00000554158 PDCD11Q14690 1871 aaKnown RBP9.05□□□□□ -0.96
ACTN1-212ENST00000554158 SPTLC1O15269 473 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 B4GALT3O60512 393 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 CCNT1O60563 726 aaKnown RBP9.05□□□□□ -0.96
ACTN1-212ENST00000554158 N4BP1O75113 896 aaKnown RBP9.05□□□□□ -0.96
ACTN1-212ENST00000554158 STBD1O95210 358 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 HNRNPA1P09651 372 aaKnown RBP eCLIP9.05□□□□□ -0.96
ACTN1-212ENST00000554158 MAGEA9P43362 315 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 AFF1P51825 1210 aaKnown RBP9.05□□□□□ -0.96
ACTN1-212ENST00000554158 ELAVL2Q12926 359 aaKnown RBP9.05□□□□□ -0.96
ACTN1-212ENST00000554158 HTR4Q13639 388 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 EPHA7Q15375 998 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 TAS1R1Q7RTX1 841 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 NEK8Q86SG6 692 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 TPH2Q8IWU9 490 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 C4orf19Q8IY42 314 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 GPR65Q8IYL9 337 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 SLFN12Q8IYM2 578 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 ZFP42Q96MM3 310 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 CEP89Q96ST8 783 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 EIF2AQ9BY44 585 aaKnown RBP9.05□□□□□ -0.96
ACTN1-212ENST00000554158 FOXQ1Q9C009 403 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 MINDY3Q9H8M7 445 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 BRMS1Q9HCU9 246 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 CDH7Q9ULB5 785 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 RAB23Q9ULC3 237 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 MRPS17Q9Y2R5 130 aaKnown RBP9.05□□□□□ -0.96
ACTN1-212ENST00000554158 HES2Q9Y543 173 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 OTOGLQ3ZCN5 2332 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 VWA8A3KMH1 1905 aa9.05□□□□□ -0.96
ACTN1-212ENST00000554158 ZNF292O60281 2723 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 CEP250Q9BV73 2442 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 KANSL1LA0AUZ9 987 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 MED19A0JLT2 244 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 EML1O00423 815 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 TBX3O15119 743 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 SLC37A4O43826 429 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 TSPAN1O60635 241 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 NPTXRO95502 500 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 RPL17P18621 184 aaKnown RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 PDIA3P30101 505 aaKnown RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 HOXA11P31270 313 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 HSPA4P34932 840 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 PTENP60484 403 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 CYP4A11Q02928 519 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 PRKCQQ04759 706 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 CSTF1Q05048 431 aaKnown RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 DSC1Q08554 894 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 SNW1Q13573 536 aaKnown RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 CTTNQ14247 550 aaKnown RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 HSP90AA2PQ14568 343 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 PPP2R5DQ14738 602 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 MLF2Q15773 248 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 NTRK3Q16288 839 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 PSMD5Q16401 504 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 AMHR2Q16671 573 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 RSPO4Q2I0M5 234 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 VARS2Q5ST30 1063 aaKnown RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 ZBTB41Q5SVQ8 909 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 UBXN11Q5T124 520 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 SLC27A1Q6PCB7 646 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 GRASPQ7Z6J2 395 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 ZBTB8OSQ8IWT0 167 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 FBXL16Q8N461 479 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 DAGLBQ8NCG7 672 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 SMG8Q8ND04 991 aaKnown RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 FEZF2Q8TBJ5 459 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 B3GALT6Q96L58 329 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 ADPGKQ9BRR6 497 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 TTPALQ9BTX7 342 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 PHF20Q9BVI0 1012 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 GMEB2Q9UKD1 530 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 FBXO4Q9UKT5 387 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 CDV3Q9UKY7 258 aaKnown RBP9.04□□□□□ -0.96
ACTN1-212ENST00000554158 SNX14Q9Y5W7 946 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 CYP46A1Q9Y6A2 500 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 CACNA1AO00555 2505 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 MYH11P35749 1972 aa9.04□□□□□ -0.96
ACTN1-212ENST00000554158 ZMYM2Q9UBW7 1377 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 LRRIQ4A6NIV6 560 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 FAM170BA6NMN3 283 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 ANHXE9PGG2 379 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 CCL16O15467 120 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 DGAT1O75907 488 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 C8AP07357 584 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 AKAP5P24588 427 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 STARD6P59095 220 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 GPC5P78333 572 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 STK3Q13188 491 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 TUSC3Q13454 348 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 ZNF528Q3MIS6 628 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 SLC44A4Q53GD3 710 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 FAM171A1Q5VUB5 890 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 PRSS55Q6UWB4 352 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-212ENST00000554158 B3GNT9Q6UX72 402 aa9.03□□□□□ -0.96
ACTN1-212ENST00000554158 RSPO2Q6UXX9 243 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms