RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 GOLGA6L7A0A1B0GV03 622 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 H0YIN7 160 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 O00370 1275 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 P4HA2O15460 535 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 RGS16O15492 202 aaPredicted RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 ATP9AO75110 1047 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CREB1P16220 341 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 EIF2AK2P19525 551 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 QARSP47897 775 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 IFNAR2P48551 515 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 NCKAP1LP55160 1127 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 SNX1Q13596 522 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 PLCB4Q15147 1175 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 PPP2R5EQ16537 467 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 GKAP1Q5VSY0 366 aaPredicted RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 STYK1Q6J9G0 422 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 RNF207Q6ZRF8 634 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 OTUD6AQ7L8S5 288 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 FMNL3Q8IVF7 1028 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCDC105Q8IYK2 499 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CPXCR1Q8N123 301 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 FAM151AQ8WW52 585 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 ART4Q93070 314 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 PRMT1Q99873 361 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 PI4K2AQ9BTU6 479 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 QTRT2Q9H974 415 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CNOT10Q9H9A5 744 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CHST7Q9NS84 486 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 CTNNAL1Q9UBT7 734 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 DBR1Q9UK59 544 aaKnown RBP7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 UBIAD1Q9Y5Z9 338 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 ADGRA3Q8IWK6 1321 aa7.44□□□□□ -1.22
LINC-ROR-201ENST00000553704 KIAA1217Q5T5P2 1943 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 GRIN3BO60391 1043 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 ICAM1P05362 532 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 MAPTP10636 758 aaKnown RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 HSPA6P17066 643 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 SMTNP53814 917 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 MTMR1Q13613 665 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 AUHQ13825 339 aaKnown RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 LONRF1Q17RB8 773 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 ZNF568Q3ZCX4 644 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 FAM102BQ5T8I3 360 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 FAM160B2Q86V87 743 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 FAM228AQ86W67 206 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCDC114Q96M63 670 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 PWWP2AQ96N64 755 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 CEP89Q96ST8 783 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 WNT8AQ9H1J5 351 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 CDC42EP4Q9H3Q1 356 aaKnown RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 KLC4Q9NSK0 619 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 TMOD2Q9NZR1 351 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 FEM1BQ9UK73 627 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 GTF3C4Q9UKN8 822 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 COL11A1P12107 1806 aaPredicted RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 MROH7Q68CQ1 1323 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCDC169A6NNP5 214 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 C21orf2O43822 256 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 ACSL3O95573 720 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 GZMAP12544 262 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 WNT7BP56706 349 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 CDR2Q01850 454 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 KRT17Q04695 432 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 CETN1Q12798 172 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 TRAF1Q13077 416 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 DRP2Q13474 957 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 ALCAMQ13740 583 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 LRRC14Q15048 493 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 TRIP13Q15645 432 aaPredicted RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 SPDYE2Q495Y8 402 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 TNFAIP8L3Q5GJ75 292 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 SWT1Q5T5J6 900 aaKnown RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 LMBRD2Q68DH5 695 aaPredicted RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 C12orf50Q8NA57 414 aaPredicted RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 TMEM161BQ8NDZ6 487 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 SYTL5Q8TDW5 730 aaPredicted RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 PARD3BQ8TEW8 1205 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 IPO4Q8TEX9 1081 aaKnown RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 TMEM174Q8WUU8 243 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 CENPTQ96BT3 561 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 HVCN1Q96D96 273 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 TAAR1Q96RJ0 339 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 FAM118BQ9BPY3 351 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 ZNF341Q9BYN7 854 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCDC113Q9H0I3 377 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 DEFB129Q9H1M3 183 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 ACTR5Q9H9F9 607 aaPredicted RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 RAVER2Q9HCJ3 691 aaKnown RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 R3HDM2Q9Y2K5 976 aaKnown RBP7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 USP20Q9Y2K6 914 aa7.43□□□□□ -1.22
LINC-ROR-201ENST00000553704 PASKQ96RG2 1323 aa7.42□□□□□ -1.22
LINC-ROR-201ENST00000553704 PODXLO00592 558 aa7.42□□□□□ -1.22
LINC-ROR-201ENST00000553704 PLA2G6O60733 806 aa7.42□□□□□ -1.22
LINC-ROR-201ENST00000553704 GGPS1O95749 300 aa7.42□□□□□ -1.22
LINC-ROR-201ENST00000553704 AGTP01019 485 aa7.42□□□□□ -1.22
LINC-ROR-201ENST00000553704 SSTR3P32745 418 aaPredicted RBP7.42□□□□□ -1.22
LINC-ROR-201ENST00000553704 HSPA1LP34931 641 aa7.42□□□□□ -1.22
LINC-ROR-201ENST00000553704 NPTX2P47972 431 aa7.42□□□□□ -1.22
LINC-ROR-201ENST00000553704 PDE6CP51160 858 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms