RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 AKIP1Q9NQ31 210 aa5.55□□□□□ -1.52
SCFD1-210ENST00000553693 LEFTY2O00292 366 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 B3GALT2O43825 422 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 HLA-DOAP06340 250 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 VIL1P09327 827 aaKnown RBP5.54□□□□□ -1.52
SCFD1-210ENST00000553693 SNRPA1P09661 255 aaKnown RBP5.54□□□□□ -1.52
SCFD1-210ENST00000553693 ZSCAN20P17040 1043 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-210ENST00000553693 RNASE9P60153 205 aaKnown RBP5.54□□□□□ -1.52
SCFD1-210ENST00000553693 MXRA7P84157 204 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 ADRM1Q16186 407 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 ANKS6Q68DC2 871 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 GPR156Q8NFN8 814 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 OR7D4Q8NG98 312 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 TGFBRAP1Q8WUH2 860 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 CEP95Q96GE4 821 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 AHCYL2Q96HN2 611 aaKnown RBP5.54□□□□□ -1.52
SCFD1-210ENST00000553693 NAF1Q96HR8 494 aaKnown RBP5.54□□□□□ -1.52
SCFD1-210ENST00000553693 ACE2Q9BYF1 805 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-210ENST00000553693 ZNF768Q9H5H4 540 aaKnown RBP5.54□□□□□ -1.52
SCFD1-210ENST00000553693 IFT122Q9HBG6 1241 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 PRKAB1Q9Y478 270 aa5.54□□□□□ -1.52
SCFD1-210ENST00000553693 PPFIA2O75334 1257 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 NCR1O76036 304 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 GCP02774 474 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 ZFP36P26651 326 aaKnown RBP5.53□□□□□ -1.52
SCFD1-210ENST00000553693 PTPN7P35236 360 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 SLC5A3P53794 718 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 SCAND1P57086 179 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 CCT2P78371 535 aaKnown RBP5.53□□□□□ -1.52
SCFD1-210ENST00000553693 TAP1Q03518 808 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 MUM1L1Q5H9M0 696 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 FAM47AQ5JRC9 791 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 RRP12Q5JTH9 1297 aaKnown RBP5.53□□□□□ -1.52
SCFD1-210ENST00000553693 MFSD14BQ5SR56 506 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 MBNL2Q5VZF2 373 aaKnown RBP5.53□□□□□ -1.52
SCFD1-210ENST00000553693 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-210ENST00000553693 ZNF572Q7Z3I7 529 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-210ENST00000553693 KRT26Q7Z3Y9 468 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 SPATS2Q86XZ4 545 aaKnown RBP5.53□□□□□ -1.52
SCFD1-210ENST00000553693 TRMT2AQ8IZ69 625 aaKnown RBP5.53□□□□□ -1.52
SCFD1-210ENST00000553693 RNF169Q8NCN4 708 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 ZG16BQ96DA0 208 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 UHRF1Q96T88 793 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-210ENST00000553693 GREM2Q9H772 168 aa5.53□□□□□ -1.52
SCFD1-210ENST00000553693 RBM12Q9NTZ6 932 aaKnown RBP5.53□□□□□ -1.52
SCFD1-210ENST00000553693 CENPVL1A0A0U1RR11 272 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 GRID2IPA4D2P6 1211 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 TMEM200CA6NKL6 621 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 GPR39O43194 453 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 ADCY6O43306 1168 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 ADSLP30566 484 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-210ENST00000553693 BMPR1AP36894 532 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 CLRN1P58418 232 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 FAM189BP81408 668 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 SP140Q13342 867 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 BEAN1Q3B7T3 259 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 ATXN7L2Q5T6C5 722 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-210ENST00000553693 KCNK18Q7Z418 384 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 SYT12Q8IV01 421 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 VRK3Q8IV63 474 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 DRC7Q8IY82 874 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 ADI1Q9BV57 179 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 CYP4F11Q9HBI6 524 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 LANCL2Q9NS86 450 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 C14orf119Q9NWQ9 140 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 DNAJC28Q9NX36 388 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 MOCS1Q9NZB8 636 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 PACSIN3Q9UKS6 424 aa5.52□□□□□ -1.53
SCFD1-210ENST00000553693 CXorf49A8MYA2 514 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-210ENST00000553693 ENDOD1O94919 500 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 NDUFA10O95299 355 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 EYA4O95677 639 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 PER3P56645 1201 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 MALLQ13021 153 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 CSRP2Q16527 193 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 PDCD4Q53EL6 469 aaKnown RBP5.51□□□□□ -1.53
SCFD1-210ENST00000553693 TOR2AQ5JU69 321 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 RNF219Q5W0B1 726 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-210ENST00000553693 ARMC6Q6NXE6 501 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 ARHGEF19Q8IW93 802 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 PQLC1Q8N2U9 271 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 WDR66Q8TBY9 1149 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 REXO4Q9GZR2 422 aaKnown RBP5.51□□□□□ -1.53
SCFD1-210ENST00000553693 SERHL2Q9H4I8 314 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 SCOCQ9UIL1 159 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 FPGT-TNNI3KV9GXZ4 949 aa5.51□□□□□ -1.53
SCFD1-210ENST00000553693 WASHC2AQ641Q2 1341 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 IL2RBP14784 551 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 ALOX15P16050 662 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-210ENST00000553693 DDX6P26196 483 aaKnown RBP eCLIP5.5□□□□□ -1.53
SCFD1-210ENST00000553693 AVPR1BP47901 424 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 PTTG1IPP53801 180 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 USP14P54578 494 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 NANOS3P60323 173 aaKnown RBP5.5□□□□□ -1.53
SCFD1-210ENST00000553693 BLOC1S1P78537 153 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 SRSF2Q01130 221 aaKnown RBP5.5□□□□□ -1.53
SCFD1-210ENST00000553693 GUCY1B3Q02153 619 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 FAM102AQ5T9C2 384 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-210ENST00000553693 HECTD2Q5U5R9 776 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms