RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 EXOC7Q9UPT5 735 aa6.55□□□□□ -1.36
VIPAS39-204ENST00000553576 PPME1Q9Y570 386 aa6.55□□□□□ -1.36
VIPAS39-204ENST00000553576 CSADQ9Y600 493 aa6.55□□□□□ -1.36
VIPAS39-204ENST00000553576 SAR1BQ9Y6B6 198 aa6.55□□□□□ -1.36
VIPAS39-204ENST00000553576 KAT6AQ92794 2004 aa6.55□□□□□ -1.36
VIPAS39-204ENST00000553576 EVPLQ92817 2033 aa6.55□□□□□ -1.36
VIPAS39-204ENST00000553576 A0A0A6YYK5 440 aaPredicted RBP6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 A0A1W2PRU2 124 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 CTAGE15A4D2H0 777 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 CCDC151A5D8V7 595 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 H0YCG3 227 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 K7ENM7 598 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 BACH1O14867 736 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 ZNF862O60290 1169 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 THBS1P07996 1170 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 SUPT20HL2P0C7V6 817 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 CCDC172P0C7W6 258 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 CTAGE8P0CG41 777 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 FERP16591 822 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 GTF2H1P32780 548 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 NPEPPSP55786 919 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 BFSP1Q12934 665 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 PPIL2Q13356 520 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 BMS1Q14692 1282 aaKnown RBP6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 BRD3Q15059 726 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 ASIC2Q16515 512 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 UGCGQ16739 394 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 BRDTQ58F21 947 aaPredicted RBP6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 XKR9Q5GH70 373 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 XKR3Q5GH77 459 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 PPP2R2DQ66LE6 453 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 MIS18BP1Q6P0N0 1132 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 KCNV1Q6PIU1 500 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 CTAGE6Q86UF2 777 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 MAP4K3Q8IVH8 894 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 CTAGE4Q8IX94 777 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 ANKRD13AQ8IZ07 590 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 SYCP3Q8IZU3 236 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 FAM133AQ8N9E0 248 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 XXYLT1Q8NBI6 393 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 SLC30A5Q8TAD4 765 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 MFSD14AQ96MC6 490 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 CEP89Q96ST8 783 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 PARD6BQ9BYG5 372 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 FHDC1Q9C0D6 1143 aaPredicted RBP6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 SPATC1LQ9H0A9 340 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 JPH1Q9HDC5 661 aaPredicted RBP6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 BTBD7Q9P203 1132 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 TRIM10Q9UDY6 481 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 TBX20Q9UMR3 447 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 COQ4Q9Y3A0 265 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 MAFBQ9Y5Q3 323 aaPredicted RBP6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 FHOD1Q9Y613 1164 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 DUSP10Q9Y6W6 482 aa6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 V9GYY5 206 aaPredicted RBP6.54□□□□□ -1.36
VIPAS39-204ENST00000553576 IGSF9BQ9UPX0 1349 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 A0A087X0T9 212 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 TARSL2A2RTX5 802 aaKnown RBP6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 CES2O00748 559 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 GNB5O14775 395 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 KIAA0391O15091 583 aaKnown RBP6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 EXOC3O60645 756 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 CNMDO75829 334 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 F11P03951 625 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 ATP1A1P05023 1023 aaKnown RBP6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 FAM228BP0C875 321 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 ACTN1P12814 892 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 KRT13P13646 458 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 ZSCAN20P17040 1043 aaPredicted RBP6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 TCP1P17987 556 aaKnown RBP6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 ERCC3P19447 782 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 GARTP22102 1010 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 CNGA1P29973 690 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 NF2P35240 595 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 SOX5P35711 763 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 STAT1P42224 750 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 NPTX2P47972 431 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 ALDH5A1P51649 535 aaPredicted RBP6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 VAMP7P51809 220 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 PEX3P56589 373 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 ACTR2P61160 394 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 SP2Q02086 613 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 GFPT1Q06210 699 aaPredicted RBP6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 CKAP4Q07065 602 aaKnown RBP6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 CETN1Q12798 172 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 MOGSQ13724 837 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 RAPGEF1Q13905 1077 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 NEDD9Q14511 834 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 C1orf220Q5T0J3 134 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 TREML2Q5T2D2 321 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 LDLRAD1Q5T700 205 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 TCERG1LQ5VWI1 586 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 IQCEQ6IPM2 695 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 SWSAP1Q6NVH7 229 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 WDR93Q6P2C0 686 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 FASTKD5Q7L8L6 764 aaKnown RBP6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 ZNF571Q7Z3V5 609 aaPredicted RBP6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 CREG2Q8IUH2 290 aa6.53□□□□□ -1.36
VIPAS39-204ENST00000553576 KSR1Q8IVT5 923 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms