RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	FPGT-TNNI3K	V9GXZ4	949 aa		5.65	□□□□□ -1.5
ATXN3-222	ENST00000553570	FAM205A	Q6ZU69	1335 aa		5.65	□□□□□ -1.51
ATXN3-222	ENST00000553570	RFXAP	O00287	272 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	WNT10B	O00744	389 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	RAB11FIP3	O75154	756 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	FUCA1	P04066	466 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	NTRK1	P04629	796 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	ASGR2	P07307	311 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	JMJD7	P0C870	316 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	CNGA1	P29973	690 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	CACNB3	P54284	484 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	ZNF280A	P59817	542 aa	Predicted RBP	5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	IGBP1	P78318	339 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	CAP1	Q01518	475 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	TCP10	Q12799	353 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	ANKRD45	Q5TZF3	282 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	TCERG1L	Q5VWI1	586 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	WWC2	Q6AWC2	1192 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	CNKSR3	Q6P9H4	555 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	RPUSD2	Q8IZ73	545 aa	Known RBP	5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	PPM1K	Q8N3J5	372 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	ZGPAT	Q8N5A5	531 aa	Known RBP	5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	SPATA5	Q8NB90	893 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	TP53I13	Q8NBR0	393 aa	Predicted RBP	5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	PCDH19	Q8TAB3	1148 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	EAF2	Q96CJ1	260 aa	Predicted RBP	5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	KIF1BP	Q96EK5	621 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	KCNC2	Q96PR1	638 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	LRRCC1	Q9C099	1032 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	RNF38	Q9H0F5	515 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	BCAS3	Q9H6U6	928 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	USP40	Q9NVE5	1235 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	TMOD2	Q9NZR1	351 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	ZNF70	Q9UC06	446 aa	Predicted RBP	5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	TIMM13	Q9Y5L4	95 aa	Predicted RBP	5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	ATAD5	Q96QE3	1844 aa		5.64	□□□□□ -1.51
ATXN3-222	ENST00000553570	UBE2Q2L	H0YL09	131 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	TRIM13	O60858	407 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	PLA2G1B	P04054	148 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	CKM	P06732	381 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	LDHC	P07864	332 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	NCAM1	P13591	858 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	NAT1	P18440	290 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	PRDX5	P30044	214 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	SOX5	P35711	763 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	BCL6	P41182	706 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	AFF3	P51826	1226 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	NEK4	P51957	841 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	HUNK	P57058	714 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	ANAPC15	P60006	121 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	FKBP1A	P62942	108 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	PAK1	Q13153	545 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	LSAMP	Q13449	338 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	TARBP2	Q15633	366 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	SEPT7	Q16181	437 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	KIZ	Q2M2Z5	673 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	CST9	Q5W186	159 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	MOB2	Q70IA6	237 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	APOBEC3F	Q8IUX4	373 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	TMEM151B	Q8IW70	566 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	LEO1	Q8WVC0	666 aa	Predicted RBP	5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	CDCA5	Q96FF9	252 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	ALG1	Q9BT22	464 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	RWDD1	Q9H446	243 aa	Predicted RBP	5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	GBA2	Q9HCG7	927 aa	Predicted RBP	5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	HMG20B	Q9P0W2	317 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	PGAP2	Q9UHJ9	254 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	RAPGEFL1	Q9UHV5	662 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	FZD1	Q9UP38	647 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	SIT1	Q9Y3P8	196 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	MAST3	O60307	1309 aa		5.63	□□□□□ -1.51
ATXN3-222	ENST00000553570	DOCK2	Q92608	1830 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570		B4E1Z4	1266 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	FFAR3	O14843	346 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	KPNA6	O60684	536 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	IDH1	O75874	414 aa	Known RBP	5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	MAP4K4	O95819	1239 aa	Predicted RBP	5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	SOD2	P04179	222 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	HMGB1	P09429	215 aa	Known RBP	5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	SRGAP2C	P0DJJ0	459 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	PML	P29590	882 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	MC3R	P41968	323 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	MCAM	P43121	646 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	LIMS1	P48059	325 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	MMP14	P50281	582 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	RPL11	P62913	178 aa	Known RBP	5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	GSTO1	P78417	241 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	MECOM	Q03112	1051 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	DLX2	Q07687	328 aa	Predicted RBP	5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	PICALM	Q13492	652 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	SLC9A5	Q14940	896 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	SUPT20HL1	Q3ZLR7	823 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	NAA16	Q6N069	864 aa	Predicted RBP	5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	CYP4F22	Q6NT55	531 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	PKN3	Q6P5Z2	889 aa		5.62	□□□□□ -1.51
ATXN3-222	ENST00000553570	UBE2R2	Q712K3	238 aa	Predicted RBP	5.62	□□□□□ -1.51

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