RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PTGESO14684 152 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 CLIC2O15247 247 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 B4GALT3O60512 393 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 UPP2O95045 317 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 PBX2P40425 430 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 RABGGTBP53611 331 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 WNT7BP56706 349 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 NLRP12P59046 1061 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 MCCD1P59942 119 aaPredicted RBP16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 NAB2Q15742 525 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 TMEM132AQ24JP5 1023 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 SLC10A6Q3KNW5 377 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 LRIT3Q3SXY7 679 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 TTI2Q6NXR4 508 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 FAM117BQ6P1L5 589 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 LRRC55Q6ZSA7 311 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 THNSL1Q8IYQ7 743 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 POMGNT1Q8WZA1 660 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 DHTKD1Q96HY7 919 aaPredicted RBP16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 ZFP42Q96MM3 310 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 RAD9AQ99638 391 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 TCHPQ9BT92 498 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 FUCA2Q9BTY2 467 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 TRIM6Q9C030 488 aaPredicted RBP16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 TMEM117Q9H0C3 514 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 HSPBP1Q9NZL4 362 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 PLAGL2Q9UPG8 496 aa16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 YBX2Q9Y2T7 364 aaKnown RBP16.2■□□□□ 0.18
MTHFD1-204ENST00000553405 CITO14578 2027 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 TTC26A0AVF1 554 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 TRIM49BA6NDI0 452 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 ARL5CA6NH57 179 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 KIF20AO95235 890 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 CLTAP09496 248 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 HARSP12081 509 aaKnown RBP16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 ITGA4P13612 1032 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 MYOGP15173 224 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 CCNE1P24864 410 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 POU5F1Q01860 360 aaKnown RBP16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 MYBPC2Q14324 1141 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 SKOR2Q2VWA4 1001 aaPredicted RBP16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 ANKRD40Q6AI12 368 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 HS2ST1Q7LGA3 356 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 MLKLQ8NB16 471 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 RNF169Q8NCN4 708 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 GOLGA5Q8TBA6 731 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 HELQQ8TDG4 1101 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 P2RX5Q93086 422 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 PGBD4Q96DM1 585 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 SAAL1Q96ER3 474 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 SNX27Q96L92 541 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 GAD1Q99259 594 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 DUSP9Q99956 384 aaKnown RBP16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 APOL6Q9BWW8 343 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 PBX4Q9BYU1 374 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 PCIF1Q9H4Z3 704 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 RSAD1Q9HA92 442 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 HCSTQ9UBK5 93 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 KIAA1671Q9BY89 1806 aa16.19■□□□□ 0.18
MTHFD1-204ENST00000553405 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 KIAA0391O15091 583 aaKnown RBP16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 EXTL3O43909 919 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 NR3C1P04150 777 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 CXCL8P10145 99 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 MLH1P40692 756 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 ACOT2P49753 483 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 OSTNP61366 133 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 EDRF1Q3B7T1 1238 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 ARMCX5Q6P1M9 558 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 APBB1IPQ7Z5R6 666 aaPredicted RBP16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 SPRED2Q7Z698 418 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 CBWD2Q8IUF1 395 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 CMTR2Q8IYT2 770 aaKnown RBP16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 ZMAT2Q96NC0 199 aaKnown RBP16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 CWH43Q9H720 699 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 UBN1Q9NPG3 1134 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 TBC1D13Q9NVG8 400 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 KLK14Q9P0G3 267 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 CNTN3Q9P232 1028 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 LRFN2Q9ULH4 789 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 PCDHA11Q9Y5I1 949 aa16.18■□□□□ 0.18
MTHFD1-204ENST00000553405 GOLGA8IPA6NC78 632 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 GOLGA8JA6NMD2 632 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 HOXA2O43364 376 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 KCNE1P15382 129 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 IBSPP21815 317 aaPredicted RBP16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 PPP1R2P41236 205 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 CASP4P49662 377 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 SMAD3P84022 425 aaKnown RBP16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 LRRC63Q05C16 580 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 DSC1Q08554 894 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 KYAT1Q16773 422 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 NOMO2Q5JPE7 1267 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 GLB1LQ6UWU2 654 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 BRSK2Q8IWQ3 736 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 GPD1LQ8N335 351 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 PLEKHO2Q8TD55 490 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 NELFBQ8WX92 580 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms