RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-204ENST00000553343 USP20Q9Y2K6 914 aa22.36■■□□□ 1.17
SDR39U1-204ENST00000553343 NR2F2P24468 414 aa22.35■■□□□ 1.17
SDR39U1-204ENST00000553343 SURF1Q15526 300 aa22.35■■□□□ 1.17
SDR39U1-204ENST00000553343 TTI2Q6NXR4 508 aa22.35■■□□□ 1.17
SDR39U1-204ENST00000553343 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.35■■□□□ 1.17
SDR39U1-204ENST00000553343 ZBTB33Q86T24 672 aa22.35■■□□□ 1.17
SDR39U1-204ENST00000553343 TDHQ8IZJ6 230 aa22.35■■□□□ 1.17
SDR39U1-204ENST00000553343 CEP63Q96MT8 703 aa22.35■■□□□ 1.17
SDR39U1-204ENST00000553343 BPIFA3Q9BQP9 254 aa22.35■■□□□ 1.17
SDR39U1-204ENST00000553343 MRPL9Q9BYD2 267 aaKnown RBP22.35■■□□□ 1.17
SDR39U1-204ENST00000553343 NXF3Q9H4D5 531 aaKnown RBP22.35■■□□□ 1.17
SDR39U1-204ENST00000553343 SYCE3A1L190 88 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 CETN3O15182 167 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 SLC16A3O15427 465 aaKnown RBP22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 GJB5O95377 273 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 XKR4Q5GH76 650 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 GLB1LQ6UWU2 654 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 USP37Q86T82 979 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 NT5DC4Q86YG4 428 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 TMEM117Q9H0C3 514 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 ASB7Q9H672 318 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 KANSL3Q9P2N6 904 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 CTNND2Q9UQB3 1225 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 FRMD4BQ9Y2L6 1034 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 CITO14578 2027 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 CEP290O15078 2479 aa22.34■■□□□ 1.17
SDR39U1-204ENST00000553343 PTPRSQ13332 1948 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 ZNF233A6NK53 670 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 TISP43B9A030 160 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 EXOC3O60645 756 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 DGKIO75912 1065 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 RECQL4O94761 1208 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 IL18RAPO95256 599 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 ATP2A2P16615 1042 aaKnown RBP22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 DEFB103AP81534 67 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 ADAM9Q13443 819 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 SHHQ15465 462 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 PRPF38BQ5VTL8 546 aaKnown RBP22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 ANKRD40Q6AI12 368 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 KLHL10Q6JEL2 608 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 AGMOQ6ZNB7 445 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 BRSK2Q8IWQ3 736 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 THNSL1Q8IYQ7 743 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 ABI1Q8IZP0 508 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 NOC3LQ8WTT2 800 aaKnown RBP22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 RPF1Q9H9Y2 349 aaKnown RBP22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 SNTG2Q9NY99 539 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 CXXC1Q9P0U4 656 aaPredicted RBP22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 DERAQ9Y315 318 aa22.33■■□□□ 1.17
SDR39U1-204ENST00000553343 GNA14O95837 355 aa22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 HARSP12081 509 aaKnown RBP22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 PRKCSHP14314 528 aaPredicted RBP22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 MCCD1P59942 119 aaPredicted RBP22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 HTRA4P83105 476 aaPredicted RBP22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 PPP2R3AQ06190 1150 aa22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 C9orf50Q5SZB4 431 aa22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 ALKAL1Q6UXT8 129 aa22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 HERC6Q8IVU3 1022 aa22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 CMTR2Q8IYT2 770 aaKnown RBP22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 ENOX1Q8TC92 643 aaKnown RBP22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 URGCPQ8TCY9 931 aa22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 ZNF689Q96CS4 500 aaPredicted RBP22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 SNX27Q96L92 541 aa22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 IKZF4Q9H2S9 585 aa22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 RC3H2Q9HBD1 1191 aaKnown RBP22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 CNTN3Q9P232 1028 aa22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 INSL6Q9Y581 213 aa22.32■■□□□ 1.16
SDR39U1-204ENST00000553343 TNRC18O15417 2968 aaPredicted RBP22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 CLIC2O15247 247 aa22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 PSMC2P35998 433 aaKnown RBP22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 SNRNP35Q16560 246 aaKnown RBP22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 CRELD2Q6UXH1 353 aaPredicted RBP22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 INTS8Q75QN2 995 aaKnown RBP22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 FILIP1Q7Z7B0 1213 aa22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 CSGALNACT2Q8N6G5 542 aa22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 CEP120Q8N960 986 aa22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 RPS6KC1Q96S38 1066 aa22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 FAM213AQ9BRX8 229 aa22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 PCIF1Q9H4Z3 704 aa22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 PARP2Q9UGN5 583 aa22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 HES2Q9Y543 173 aa22.31■■□□□ 1.16
SDR39U1-204ENST00000553343 TTC26A0AVF1 554 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 XPOTO43592 962 aaKnown RBP22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 OFD1O75665 1012 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 KCNE1P15382 129 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 CYP2J2P51589 502 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 PMS1P54277 932 aaKnown RBP22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 ZNF445P59923 1031 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 GRIK3Q13003 919 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 ENOX2Q16206 610 aaKnown RBP22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 LRRC55Q6ZSA7 311 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 LRRC43Q8N309 656 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 RAD9AQ99638 391 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 METTL14Q9HCE5 456 aaKnown RBP22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 RNF19AQ9NV58 838 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 SLC38A7Q9NVC3 462 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 RBAKQ9NYW8 714 aaPredicted RBP22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 C2CD2Q9Y426 696 aa22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 FNDC1Q4ZHG4 1894 aaPredicted RBP22.3■■□□□ 1.16
SDR39U1-204ENST00000553343 PDCD11Q14690 1871 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms