RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 VPS37CA5D8V6 355 aaPredicted RBP17.48■□□□□ 0.39
CDK4-215ENST00000553237 TEX28O15482 410 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 THP07101 528 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 MTHFRP42898 656 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 DSG1Q02413 1049 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 TUSC3Q13454 348 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 CUL4AQ13619 759 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 DCAF4L1Q3SXM0 396 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 ATAT1Q5SQI0 421 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 HYIQ5T013 277 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 ARL6IP4Q66PJ3 421 aaKnown RBP17.48■□□□□ 0.39
CDK4-215ENST00000553237 SYT2Q8N9I0 419 aaPredicted RBP17.48■□□□□ 0.39
CDK4-215ENST00000553237 HASPINQ8TF76 798 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 EDAQ92838 391 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 RIPOR3Q96MK2 946 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 NECTIN4Q96NY8 510 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 HCN4Q9Y3Q4 1203 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 ZMYM2Q9UBW7 1377 aa17.48■□□□□ 0.39
CDK4-215ENST00000553237 TDRD15B5MCY1 1934 aaKnown RBP17.47■□□□□ 0.39
CDK4-215ENST00000553237 SLC16A4O15374 487 aa17.47■□□□□ 0.39
CDK4-215ENST00000553237 PLA2G4BP0C869 781 aa17.47■□□□□ 0.39
CDK4-215ENST00000553237 HSP90AA2PQ14568 343 aaPredicted RBP17.47■□□□□ 0.39
CDK4-215ENST00000553237 TAS1R3Q7RTX0 852 aa17.47■□□□□ 0.39
CDK4-215ENST00000553237 GLYCTKQ8IVS8 523 aa17.47■□□□□ 0.39
CDK4-215ENST00000553237 ACO2Q99798 780 aaKnown RBP17.47■□□□□ 0.39
CDK4-215ENST00000553237 TARS2Q9BW92 718 aaKnown RBP17.47■□□□□ 0.39
CDK4-215ENST00000553237 NT5C3AQ9H0P0 336 aa17.47■□□□□ 0.39
CDK4-215ENST00000553237 TMEM134Q9H6X4 195 aa17.47■□□□□ 0.39
CDK4-215ENST00000553237 RXFP1Q9HBX9 757 aa17.47■□□□□ 0.39
CDK4-215ENST00000553237 CHST7Q9NS84 486 aa17.47■□□□□ 0.39
CDK4-215ENST00000553237 TNFSF13BQ9Y275 285 aa17.47■□□□□ 0.39
CDK4-215ENST00000553237 NR2E1Q9Y466 385 aa17.47■□□□□ 0.39
CDK4-215ENST00000553237 PHLPP2Q6ZVD8 1323 aa17.47■□□□□ 0.39
CDK4-215ENST00000553237 NPHP3-ACAD11A0A0J9YXS1 232 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 C2CD4DB7Z1M9 353 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 ADH1AP07327 375 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 SPATA31D3P0C874 917 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 GUCY2CP25092 1073 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 SLC12A3P55017 1021 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 OSTNP61366 133 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 ZXDAP98168 799 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
CDK4-215ENST00000553237 GRIN1Q05586 938 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 USP41Q3LFD5 358 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 TMEM119Q4V9L6 283 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 GLRA4Q5JXX5 417 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 SPATA31D4Q6ZUB0 917 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 HFE2Q6ZVN8 426 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 BRAPQ7Z569 592 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 APBB1IPQ7Z5R6 666 aaPredicted RBP17.46■□□□□ 0.39
CDK4-215ENST00000553237 ZBTB33Q86T24 672 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 PALB2Q86YC2 1186 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 CEP120Q8N960 986 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 RIN2Q8WYP3 895 aaPredicted RBP17.46■□□□□ 0.39
CDK4-215ENST00000553237 MRPL4Q9BYD3 311 aaKnown RBP17.46■□□□□ 0.39
CDK4-215ENST00000553237 SFXN1Q9H9B4 322 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 MAN1C1Q9NR34 630 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 ARHGAP28Q9P2N2 729 aa17.46■□□□□ 0.39
CDK4-215ENST00000553237 RBM19Q9Y4C8 960 aaKnown RBP17.46■□□□□ 0.39
CDK4-215ENST00000553237 KIF4AO95239 1232 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 HARSP12081 509 aaKnown RBP17.45■□□□□ 0.38
CDK4-215ENST00000553237 RPL17P18621 184 aaKnown RBP17.45■□□□□ 0.38
CDK4-215ENST00000553237 UBA7P41226 1012 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 DHX8Q14562 1220 aaKnown RBP17.45■□□□□ 0.38
CDK4-215ENST00000553237 SF3A1Q15459 793 aaKnown RBP17.45■□□□□ 0.38
CDK4-215ENST00000553237 NAB2Q15742 525 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 ZNF568Q3ZCX4 644 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 GPR149Q86SP6 731 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 CEP57Q86XR8 500 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 AK8Q96MA6 479 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 TCHPQ9BT92 498 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 TIPINQ9BVW5 301 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 CDT1Q9H211 546 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 C17orf75Q9HAS0 396 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 FOXD4L1Q9NU39 408 aa17.45■□□□□ 0.38
CDK4-215ENST00000553237 GLUD1P00367 558 aa17.44■□□□□ 0.38
CDK4-215ENST00000553237 PLS3P13797 630 aa17.44■□□□□ 0.38
CDK4-215ENST00000553237 ARSHQ5FYA8 562 aa17.44■□□□□ 0.38
CDK4-215ENST00000553237 FAM171A1Q5VUB5 890 aa17.44■□□□□ 0.38
CDK4-215ENST00000553237 PRSS55Q6UWB4 352 aaPredicted RBP17.44■□□□□ 0.38
CDK4-215ENST00000553237 TRIM67Q6ZTA4 783 aa17.44■□□□□ 0.38
CDK4-215ENST00000553237 KCTD17Q8N5Z5 321 aa17.44■□□□□ 0.38
CDK4-215ENST00000553237 LRRC15Q8TF66 581 aa17.44■□□□□ 0.38
CDK4-215ENST00000553237 CALML4Q96GE6 196 aa17.44■□□□□ 0.38
CDK4-215ENST00000553237 ZBTB45Q96K62 511 aaPredicted RBP17.44■□□□□ 0.38
CDK4-215ENST00000553237 NTPCRQ9BSD7 190 aaKnown RBP17.44■□□□□ 0.38
CDK4-215ENST00000553237 CCDC94Q9BW85 323 aaPredicted RBP17.44■□□□□ 0.38
CDK4-215ENST00000553237 PTPRHQ9HD43 1115 aa17.44■□□□□ 0.38
CDK4-215ENST00000553237 SF3B1O75533 1304 aaKnown RBP eCLIP17.44■□□□□ 0.388e-9■■■■■ 155.1
CDK4-215ENST00000553237 TMEM221A6NGB7 291 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 M0R296 226 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 BMP15O95972 392 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 PDCP20941 246 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 IGFBP6P24592 240 aaPredicted RBP17.43■□□□□ 0.38
CDK4-215ENST00000553237 GRM5P41594 1212 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 SMTNP53814 917 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 STRN3Q13033 797 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 KARSQ15046 597 aaKnown RBP17.43■□□□□ 0.38
CDK4-215ENST00000553237 PTPN21Q16825 1174 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 RTP2Q5QGT7 225 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms