RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 PRR23BQ6ZRT6 265 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 DHX32Q7L7V1 743 aaKnown RBP14.42□□□□□ -0.1
VPS29-211ENST00000553128 CDR2LQ86X02 465 aaPredicted RBP14.42□□□□□ -0.1
VPS29-211ENST00000553128 GPR65Q8IYL9 337 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 RASEFQ8IZ41 740 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 LNX1Q8TBB1 728 aaPredicted RBP14.42□□□□□ -0.1
VPS29-211ENST00000553128 SLC7A14Q8TBB6 771 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 ETNPPLQ8TBG4 499 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 TBCKQ8TEA7 893 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 CCDC12Q8WUD4 166 aaPredicted RBP14.42□□□□□ -0.1
VPS29-211ENST00000553128 PSPC1Q8WXF1 523 aaKnown RBP14.42□□□□□ -0.1
VPS29-211ENST00000553128 MCRS1Q96EZ8 462 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 CEP170P1Q96L14 293 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 ESYT1Q9BSJ8 1104 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 DHX33Q9H6R0 707 aaKnown RBP14.42□□□□□ -0.1
VPS29-211ENST00000553128 ANO2Q9NQ90 1003 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 KLK14Q9P0G3 267 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 VPS54Q9P1Q0 977 aa14.42□□□□□ -0.1
VPS29-211ENST00000553128 TDRD15B5MCY1 1934 aaKnown RBP14.41□□□□□ -0.1
VPS29-211ENST00000553128 NCAM2O15394 837 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 PRPF3O43395 683 aaKnown RBP14.41□□□□□ -0.1
VPS29-211ENST00000553128 TADA2AO75478 443 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 RETP07949 1114 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 CPA1P15085 419 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 PSMC5P62195 406 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 DMWDQ09019 674 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 SLC5A9Q2M3M2 681 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 TANGO2Q6ICL3 276 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 PRR23CQ6ZRP0 262 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 FERMT3Q86UX7 667 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 SLC7A3Q8WY07 619 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 NELL2Q99435 816 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 JPH2Q9BR39 696 aaPredicted RBP14.41□□□□□ -0.1
VPS29-211ENST00000553128 FAM126AQ9BYI3 521 aaPredicted RBP14.41□□□□□ -0.1
VPS29-211ENST00000553128 CSRNP2Q9H175 543 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 RAB23Q9ULC3 237 aa14.41□□□□□ -0.1
VPS29-211ENST00000553128 ATRXP46100 2492 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 ZBTB39O15060 712 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 XYLBO75191 536 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 ECI2O75521 394 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 ERLIN2O94905 339 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 KIF4AO95239 1232 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 IGFBP6P24592 240 aaPredicted RBP14.4□□□□□ -0.1
VPS29-211ENST00000553128 PMLP29590 882 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 HOXA9P31269 272 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 HOXC13P31276 330 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 CREMQ03060 361 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 GRM2Q14416 872 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 HSP90AA2PQ14568 343 aaPredicted RBP14.4□□□□□ -0.1
VPS29-211ENST00000553128 PSMD5Q16401 504 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 AMHR2Q16671 573 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 PABPC1LQ4VXU2 614 aaKnown RBP14.4□□□□□ -0.1
VPS29-211ENST00000553128 AXDND1Q5T1B0 1012 aaPredicted RBP14.4□□□□□ -0.1
VPS29-211ENST00000553128 N4BP2L1Q5TBK1 243 aaPredicted RBP14.4□□□□□ -0.1
VPS29-211ENST00000553128 FAM171A1Q5VUB5 890 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 NOTUMQ6P988 496 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 CEP57Q86XR8 500 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 POTEDQ86YR6 584 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 CELF5Q8N6W0 485 aaKnown RBP14.4□□□□□ -0.1
VPS29-211ENST00000553128 PIK3R5Q8WYR1 880 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 TTPALQ9BTX7 342 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 CXCL16Q9H2A7 254 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 CHRDQ9H2X0 955 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 ANGPTL2Q9UKU9 493 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 GIT1Q9Y2X7 761 aa14.4□□□□□ -0.1
VPS29-211ENST00000553128 SF3B1O75533 1304 aaKnown RBP eCLIP14.4□□□□□ -0.1
VPS29-211ENST00000553128 CYP3A7-CYP3A51PA0A087WV96 503 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 CASTOR2A6NHX0 329 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 B4GALT5O43286 388 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 HRO43593 1189 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 CEBPBP17676 345 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 ARF4P18085 180 aaPredicted RBP14.39□□□□□ -0.11
VPS29-211ENST00000553128 FCARP24071 287 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 CYP3A7P24462 503 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 PTENP60484 403 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 SATB1Q01826 763 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 GRIK3Q13003 919 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 GAS6Q14393 721 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 EMC2Q15006 297 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 CSRP2Q16527 193 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 BICD2Q8TD16 824 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 XPNPEP1Q9NQW7 623 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 LAMA1P25391 3075 aa14.39□□□□□ -0.11
VPS29-211ENST00000553128 INO80B-WBP1J3KQ70 363 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 SLC37A4O43826 429 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 NPTXRO95502 500 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 AXLP30530 894 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 QARSP47897 775 aaKnown RBP14.38□□□□□ -0.11
VPS29-211ENST00000553128 RCAN1P53805 252 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 NRLP54845 237 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 MBTD1Q05BQ5 628 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 SIM2Q14190 667 aaPredicted RBP14.38□□□□□ -0.11
VPS29-211ENST00000553128 NTRK3Q16288 839 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 CCDC51Q96ER9 411 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 TRIM6Q9C030 488 aaPredicted RBP14.38□□□□□ -0.11
VPS29-211ENST00000553128 LMAN1LQ9HAT1 526 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 PARP2Q9UGN5 583 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 VAV3Q9UKW4 847 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 KCNH3Q9ULD8 1083 aa14.38□□□□□ -0.11
VPS29-211ENST00000553128 MRPS17Q9Y2R5 130 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms