RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 TTLL13PA6NNM8 815 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 AP5Z1O43299 807 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 FAM189A1O60320 539 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 TPM1P09493 284 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 GRM5P41594 1212 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 RAB27AP51159 221 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 ATN1P54259 1190 aaPredicted RBP11.3□□□□□ -0.6
NEK3-203ENST00000551355 YARSP54577 528 aaKnown RBP11.3□□□□□ -0.6
NEK3-203ENST00000551355 CLDN10P78369 228 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 TLE2Q04725 743 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 KCNH2Q12809 1159 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 TRIM14Q14142 442 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 DCAF17Q5H9S7 520 aaPredicted RBP11.3□□□□□ -0.6
NEK3-203ENST00000551355 SPECC1LQ69YQ0 1117 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 NT5DC4Q86YG4 428 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 BRSK2Q8IWQ3 736 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 DRC7Q8IY82 874 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 PARD3BQ8TEW8 1205 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 APBB2Q92870 758 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 CPB2Q96IY4 423 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 PAWRQ96IZ0 340 aaKnown RBP11.3□□□□□ -0.6
NEK3-203ENST00000551355 PDLIM2Q96JY6 352 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 ACAP3Q96P50 834 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 ERGIC2Q96RQ1 377 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 NUP58Q9BVL2 599 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 FTHL17Q9BXU8 183 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 ASB7Q9H672 318 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 ERVK-5Q9HDB9 667 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 TOPORSQ9NS56 1045 aaPredicted RBP11.3□□□□□ -0.6
NEK3-203ENST00000551355 DAAM1Q9Y4D1 1078 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.3□□□□□ -0.6
NEK3-203ENST00000551355 FRMPD3Q5JV73 1810 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 KAT6AQ92794 2004 aa11.3□□□□□ -0.6
NEK3-203ENST00000551355 STAG3L1P0CL83 205 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 HARSP12081 509 aaKnown RBP11.29□□□□□ -0.6
NEK3-203ENST00000551355 FGFR4P22455 802 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 RFC2P35250 354 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 ACOT2P49753 483 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 FAAP100Q0VG06 881 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 NFX1Q12986 1120 aaKnown RBP11.29□□□□□ -0.6
NEK3-203ENST00000551355 LPIN1Q14693 890 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 TRIM60Q495X7 471 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 EEF1DP3Q658K8 133 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 TWF2Q6IBS0 349 aaKnown RBP11.29□□□□□ -0.6
NEK3-203ENST00000551355 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 CRELD2Q6UXH1 353 aaPredicted RBP11.29□□□□□ -0.6
NEK3-203ENST00000551355 WDR49Q8IV35 697 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 VSTM4Q8IW00 320 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 THNSL1Q8IYQ7 743 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 DIS3LQ8TF46 1054 aaKnown RBP11.29□□□□□ -0.6
NEK3-203ENST00000551355 PPP1R9BQ96SB3 815 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 HAPLN2Q9GZV7 340 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 HIPK3Q9H422 1215 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 PADI3Q9ULW8 664 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 USP20Q9Y2K6 914 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 DERAQ9Y315 318 aa11.29□□□□□ -0.6
NEK3-203ENST00000551355 ZNF623O75123 536 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 NPTXRO95502 500 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 ADRB2P07550 413 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 CLTBP09497 229 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 GHRP10912 638 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 PBX1P40424 430 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 FMO5P49326 533 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 GSDMDP57764 484 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 KRT39Q6A163 491 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 SMYD5Q6GMV2 418 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 GBP6Q6ZN66 633 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 CACTINQ8WUQ7 758 aaKnown RBP11.28□□□□□ -0.6
NEK3-203ENST00000551355 CCDC127Q96BQ5 260 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 CGRRF1Q99675 332 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 IFIH1Q9BYX4 1025 aaKnown RBP11.28□□□□□ -0.6
NEK3-203ENST00000551355 EDEM3Q9BZQ6 932 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 TMEM8AQ9HCN3 771 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 UBN1Q9NPG3 1134 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 C1orf112Q9NSG2 853 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 TMEM39AQ9NV64 488 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 INTS13Q9NVM9 706 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 ATP11BQ9Y2G3 1177 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 SIP14410 1827 aa11.28□□□□□ -0.6
NEK3-203ENST00000551355 A0A0U1RQF3 1178 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 LRRIQ3A6PVS8 624 aaPredicted RBP11.27□□□□□ -0.61
NEK3-203ENST00000551355 TEX33O43247 280 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 DLATP10515 647 aaKnown RBP11.27□□□□□ -0.61
NEK3-203ENST00000551355 TNNI1P19237 187 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 RFX1P22670 979 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 CD52P31358 61 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 MXI1P50539 228 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 MYL7Q01449 175 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 DSC3Q14574 896 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 ENOX2Q16206 610 aaKnown RBP11.27□□□□□ -0.61
NEK3-203ENST00000551355 EXOC3L4Q17RC7 722 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 DUOXA2Q1HG44 320 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 FIGNQ5HY92 759 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 UBE2Q1Q7Z7E8 422 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 PPFIBP1Q86W92 1011 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 RSPH1Q8WYR4 309 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 SEPT8Q92599 483 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 PGBD4Q96DM1 585 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 FAM81BQ96LP2 452 aa11.27□□□□□ -0.61
NEK3-203ENST00000551355 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms