RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 GRIK3Q13003 919 aa16.42■□□□□ 0.22
TMEM106C-216ENST00000551305 NFKBIZQ9BYH8 718 aa16.42■□□□□ 0.22
TMEM106C-216ENST00000551305 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.42■□□□□ 0.22
TMEM106C-216ENST00000551305 ZDHHC7Q9NXF8 308 aa16.42■□□□□ 0.22
TMEM106C-216ENST00000551305 USP20Q9Y2K6 914 aa16.42■□□□□ 0.22
TMEM106C-216ENST00000551305 CASTOR2A6NHX0 329 aa16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 LRRIQ4A6NIV6 560 aa16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 BTBD18B2RXH4 712 aa16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 ANHXE9PGG2 379 aa16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 ZMYND10O75800 440 aa16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 NTHL1P78549 312 aa16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 HSP90AA2PQ14568 343 aaPredicted RBP16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 GRASPQ7Z6J2 395 aaPredicted RBP16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 CEP57Q86XR8 500 aa16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 WASF1Q92558 559 aa16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 NXPE3Q969Y0 559 aa16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 CCDC43Q96MW1 224 aaKnown RBP16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 NUMBLQ9Y6R0 609 aa16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 R4GN57 208 aa16.41■□□□□ 0.22
TMEM106C-216ENST00000551305 DOCK8Q8NF50 2099 aa16.4■□□□□ 0.22
TMEM106C-216ENST00000551305 POTEMA6NI47 508 aa16.4■□□□□ 0.22
TMEM106C-216ENST00000551305 LARGE1O95461 756 aa16.4■□□□□ 0.22
TMEM106C-216ENST00000551305 FSHRP23945 695 aa16.4■□□□□ 0.22
TMEM106C-216ENST00000551305 HTR4Q13639 388 aa16.4■□□□□ 0.22
TMEM106C-216ENST00000551305 KCNG4Q8TDN1 519 aa16.4■□□□□ 0.22
TMEM106C-216ENST00000551305 MTMR9Q96QG7 549 aa16.4■□□□□ 0.22
TMEM106C-216ENST00000551305 CLSTN3Q9BQT9 956 aa16.4■□□□□ 0.22
TMEM106C-216ENST00000551305 TMEM60Q9H2L4 133 aa16.4■□□□□ 0.22
TMEM106C-216ENST00000551305 SNTG2Q9NY99 539 aa16.4■□□□□ 0.22
TMEM106C-216ENST00000551305 MTCL1Q9Y4B5 1905 aaKnown RBP16.4■□□□□ 0.22
TMEM106C-216ENST00000551305 PTGESO14684 152 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 ADAM12O43184 909 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 NEMFO60524 1076 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 KIF4AO95239 1232 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 C1RP00736 705 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 SPATA31C1P0DKV0 1188 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 IGFBP6P24592 240 aaPredicted RBP16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 ID4P47928 161 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 TUSC3Q13454 348 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 ME3Q16798 604 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 FAM171A1Q5VUB5 890 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 PARM1Q6UWI2 310 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 GPR65Q8IYL9 337 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 LNX1Q8TBB1 728 aaPredicted RBP16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 FOXQ1Q9C009 403 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 FZD8Q9H461 694 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 BRMS1Q9HCU9 246 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 ARHGEF3Q9NR81 526 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 DLGAP2Q9P1A6 1054 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 FBXW11Q9UKB1 542 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 SIT1Q9Y3P8 196 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 RIF1Q5UIP0 2472 aaKnown RBP16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 FAM186AA6NE01 2351 aa16.39■□□□□ 0.21
TMEM106C-216ENST00000551305 LRRN2O75325 713 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 MED24O75448 989 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 XRCC6P12956 609 aaKnown RBP eCLIP16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 LIG1P18858 919 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 ATP2B1P20020 1258 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 GPC5P78333 572 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 FOXK2Q01167 660 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 PHLDB3Q6NSJ2 640 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 DCLRE1AQ6PJP8 1040 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 CATSPER3Q86XQ3 398 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 DIS3L2Q8IYB7 885 aaKnown RBP16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 BSNDQ8WZ55 320 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 FGF14Q92915 247 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 TTPALQ9BTX7 342 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 PDZD7Q9H5P4 517 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 PRMT7Q9NVM4 692 aaPredicted RBP16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 DOCK6Q96HP0 2047 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 SF3B1O75533 1304 aaKnown RBP eCLIP16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 VPS13AQ96RL7 3174 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 CCL16O15467 120 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 JAK2O60674 1132 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 EDN1P05305 212 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 GLULP15104 373 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 CREMQ03060 361 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 NAB2Q15742 525 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 PSMD5Q16401 504 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 CDCA2Q69YH5 1023 aaPredicted RBP16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 NOSTRINQ8IVI9 506 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 NSUN7Q8NE18 718 aaKnown RBP16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 POLD4Q9HCU8 107 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 SLC2A4RGQ9NR83 387 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 POLIQ9UNA4 740 aa16.38■□□□□ 0.21
TMEM106C-216ENST00000551305 RECQL4O94761 1208 aa16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 LMNAP02545 664 aaKnown RBP16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 THP07101 528 aa16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 C8AP07357 584 aa16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 MCM7P33993 719 aa16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 SNW1Q13573 536 aaKnown RBP16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 FAM187BQ17R55 369 aa16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 TMEM132AQ24JP5 1023 aa16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 PPM1LQ5SGD2 360 aa16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 LIN9Q5TKA1 542 aa16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 EEF1DP3Q658K8 133 aa16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 ZBTB8OSQ8IWT0 167 aa16.37■□□□□ 0.21
TMEM106C-216ENST00000551305 ITFG1Q8TB96 612 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms