RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 PPP6R2O75170 966 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 ADH1AP07327 375 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 PTPN5P54829 565 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 CEBPZQ03701 1054 aaKnown RBP14.8□□□□□ -0.04
NUP188-211ENST00000550219 POU5F1BQ06416 359 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 DSC1Q08554 894 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 GRIK3Q13003 919 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 GPR149Q86SP6 731 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 GLYCTKQ8IVS8 523 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 MCPH1Q8NEM0 835 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 PHOX2BQ99453 314 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 NFKBIZQ9BYH8 718 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 PRMT7Q9NVM4 692 aaPredicted RBP14.8□□□□□ -0.04
NUP188-211ENST00000550219 LIMD1Q9UGP4 676 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 GIT1Q9Y2X7 761 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 PLXNA3P51805 1871 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 TDRD15B5MCY1 1934 aaKnown RBP14.8□□□□□ -0.04
NUP188-211ENST00000550219 ZNF318Q5VUA4 2279 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 MUC6Q6W4X9 2439 aa14.8□□□□□ -0.04
NUP188-211ENST00000550219 SPTLC2O15270 562 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 INPPL1O15357 1258 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 TEX28O15482 410 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 LILRB3O75022 631 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 GLUD1P00367 558 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 STK38Q15208 465 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 IL17AQ16552 155 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 FUT10Q6P4F1 479 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 UBALD2Q8IYN6 164 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 ZDHHC14Q8IZN3 488 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 KCNG4Q8TDN1 519 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 HASPINQ8TF76 798 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 BSNDQ8WZ55 320 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 ACSF2Q96CM8 615 aaPredicted RBP14.79□□□□□ -0.04
NUP188-211ENST00000550219 NACC1Q96RE7 527 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 COLEC11Q9BWP8 271 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 FAM86C1Q9NVL1 165 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 SSX2IPQ9Y2D8 614 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 USP20Q9Y2K6 914 aa14.79□□□□□ -0.04
NUP188-211ENST00000550219 SRPRBQ9Y5M8 271 aaKnown RBP14.79□□□□□ -0.04
NUP188-211ENST00000550219 CASTOR2A6NHX0 329 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 PRKCBP05771 671 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 AVPR2P30518 371 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 CCT6AP40227 531 aaKnown RBP14.78□□□□□ -0.04
NUP188-211ENST00000550219 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.04
NUP188-211ENST00000550219 HAUS3Q68CZ6 603 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 CDCA2Q69YH5 1023 aaPredicted RBP14.78□□□□□ -0.04
NUP188-211ENST00000550219 ELMSAN1Q6PJG2 1045 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 PADI6Q6TGC4 694 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 PPP4R3CPQ6ZMV5 832 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 PLCD3Q8N3E9 789 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 DEPTORQ8TB45 409 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 SPATA32Q96LK8 384 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 POLR3CQ9BUI4 534 aaPredicted RBP14.78□□□□□ -0.04
NUP188-211ENST00000550219 KIFC3Q9BVG8 833 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 PDZD7Q9H5P4 517 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 FBXO2Q9UK22 296 aaPredicted RBP14.78□□□□□ -0.04
NUP188-211ENST00000550219 USTQ9Y2C2 406 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 MYH15Q9Y2K3 1946 aa14.78□□□□□ -0.04
NUP188-211ENST00000550219 C2orf16Q68DN1 1984 aa14.77□□□□□ -0.04
NUP188-211ENST00000550219 A0A1B0GUA9 196 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 TTLL13PA6NNM8 815 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 N4BP3O15049 544 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 RFPL2O75678 378 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 RECQL4O94761 1208 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 SPATA31D3P0C874 917 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 XRCC6P12956 609 aaKnown RBP eCLIP14.77□□□□□ -0.05
NUP188-211ENST00000550219 RPL17P18621 184 aaKnown RBP14.77□□□□□ -0.05
NUP188-211ENST00000550219 MARCKSP29966 332 aaPredicted RBP14.77□□□□□ -0.05
NUP188-211ENST00000550219 DSG1Q02413 1049 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 TCF15Q12870 199 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 PRPF4BQ13523 1007 aaKnown RBP14.77□□□□□ -0.05
NUP188-211ENST00000550219 DTHD1Q6ZMT9 781 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 SPATA31D4Q6ZUB0 917 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 OTOP3Q7RTS5 596 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 PALB2Q86YC2 1186 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 RNF168Q8IYW5 571 aaPredicted RBP14.77□□□□□ -0.05
NUP188-211ENST00000550219 GSTCDQ8NEC7 633 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 RIN2Q8WYP3 895 aaPredicted RBP14.77□□□□□ -0.05
NUP188-211ENST00000550219 PRIMPOLQ96LW4 560 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 PRRX2Q99811 253 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 ADPGKQ9BRR6 497 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 GPR62Q9BZJ7 368 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 C2orf40Q9H1Z8 148 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 MFSD1Q9H3U5 465 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 POLD4Q9HCU8 107 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 SNTG2Q9NY99 539 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 ADAM28Q9UKQ2 775 aa14.77□□□□□ -0.05
NUP188-211ENST00000550219 CLUHO75153 1309 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 CCDC195A0A1B0GUA6 201 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 TADA2AO75478 443 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 EDN1P05305 212 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 CYP11B2P19099 503 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 RPA1P27694 616 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 GBP2P32456 591 aaPredicted RBP14.76□□□□□ -0.05
NUP188-211ENST00000550219 PDIA5Q14554 519 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 HSP90AA2PQ14568 343 aaPredicted RBP14.76□□□□□ -0.05
NUP188-211ENST00000550219 MAPK6Q16659 721 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 AXDND1Q5T1B0 1012 aaPredicted RBP14.76□□□□□ -0.05
NUP188-211ENST00000550219 KIAA0319Q5VV43 1072 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 PRSS55Q6UWB4 352 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms