RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 POTEMA6NI47 508 aa17.08■□□□□ 0.32
RAB5C-205ENST00000550013 LRRIQ4A6NIV6 560 aa17.08■□□□□ 0.32
RAB5C-205ENST00000550013 TTLL13PA6NNM8 815 aa17.08■□□□□ 0.32
RAB5C-205ENST00000550013 BTBD18B2RXH4 712 aa17.08■□□□□ 0.32
RAB5C-205ENST00000550013 NEMFO60524 1076 aa17.08■□□□□ 0.32
RAB5C-205ENST00000550013 GET4Q7L5D6 327 aaPredicted RBP17.08■□□□□ 0.32
RAB5C-205ENST00000550013 ADSSL1Q8N142 457 aa17.08■□□□□ 0.32
RAB5C-205ENST00000550013 HASPINQ8TF76 798 aa17.08■□□□□ 0.32
RAB5C-205ENST00000550013 MTMR9Q96QG7 549 aa17.08■□□□□ 0.32
RAB5C-205ENST00000550013 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.32
RAB5C-205ENST00000550013 ZDHHC7Q9NXF8 308 aa17.08■□□□□ 0.32
RAB5C-205ENST00000550013 EP300Q09472 2414 aaPredicted RBP17.08■□□□□ 0.32
RAB5C-205ENST00000550013 ZMYM2Q9UBW7 1377 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 TADA2AO75478 443 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 SRFP11831 508 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 HSP90AA2PQ14568 343 aaPredicted RBP17.07■□□□□ 0.32
RAB5C-205ENST00000550013 ME3Q16798 604 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 RTP2Q5QGT7 225 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 DIS3L2Q8IYB7 885 aaKnown RBP17.07■□□□□ 0.32
RAB5C-205ENST00000550013 GPR65Q8IYL9 337 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 GTF3C6Q969F1 213 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 CXCL16Q9H2A7 254 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 TMEM60Q9H2L4 133 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 TBC1D17Q9HA65 648 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 VWA8A3KMH1 1905 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 MYH15Q9Y2K3 1946 aa17.07■□□□□ 0.32
RAB5C-205ENST00000550013 DCHS1Q96JQ0 3298 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 FRYLO94915 3013 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 SF3B1O75533 1304 aaKnown RBP eCLIP17.06■□□□□ 0.32
RAB5C-205ENST00000550013 CASTOR2A6NHX0 329 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 JAK2O60674 1132 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 ZMYND10O75800 440 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 C1RP00736 705 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 SPATA31C1P0DKV0 1188 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 LAMP2P13473 410 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 RFX1P22670 979 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 TUSC3Q13454 348 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 HTR4Q13639 388 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 ANKRD1Q15327 319 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 NSUN7Q8NE18 718 aaKnown RBP17.06■□□□□ 0.32
RAB5C-205ENST00000550013 GPR152Q8TDT2 470 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 PRMT7Q9NVM4 692 aaPredicted RBP17.06■□□□□ 0.32
RAB5C-205ENST00000550013 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.06■□□□□ 0.32
RAB5C-205ENST00000550013 USP20Q9Y2K6 914 aa17.06■□□□□ 0.32
RAB5C-205ENST00000550013 ANHXE9PGG2 379 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 PTGESO14684 152 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 MED24O75448 989 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 KIF4AO95239 1232 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 XRCC6P12956 609 aaKnown RBP eCLIP17.05■□□□□ 0.32
RAB5C-205ENST00000550013 NTHL1P78549 312 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 CREMQ03060 361 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 CDCA2Q69YH5 1023 aaPredicted RBP17.05■□□□□ 0.32
RAB5C-205ENST00000550013 BSNDQ8WZ55 320 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 NXPE3Q969Y0 559 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 CLSTN3Q9BQT9 956 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 FZD8Q9H461 694 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 PDZD7Q9H5P4 517 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 SNTG2Q9NY99 539 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 FBXW11Q9UKB1 542 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 NUMBLQ9Y6R0 609 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 TRIP11Q15643 1979 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 DMXL1Q9Y485 3027 aa17.05■□□□□ 0.32
RAB5C-205ENST00000550013 ADAM12O43184 909 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 RECQL4O94761 1208 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 EDN1P05305 212 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 DCNP07585 359 aaKnown RBP17.04■□□□□ 0.32
RAB5C-205ENST00000550013 ATP2B1P20020 1258 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 ANAPC15P60006 121 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 PSMD5Q16401 504 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 SPECC1Q5M775 1068 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 FAM171A1Q5VUB5 890 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 GRASPQ7Z6J2 395 aaPredicted RBP17.04■□□□□ 0.32
RAB5C-205ENST00000550013 CATSPER3Q86XQ3 398 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 CEP57Q86XR8 500 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 NOSTRINQ8IVI9 506 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 ZBTB8OSQ8IWT0 167 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 MCPH1Q8NEM0 835 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 LNX1Q8TBB1 728 aaPredicted RBP17.04■□□□□ 0.32
RAB5C-205ENST00000550013 PRIMPOLQ96LW4 560 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 TTPALQ9BTX7 342 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 RPP25Q9BUL9 199 aaKnown RBP17.04■□□□□ 0.32
RAB5C-205ENST00000550013 ARHGEF3Q9NR81 526 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 CACNA1IQ9P0X4 2223 aa17.04■□□□□ 0.32
RAB5C-205ENST00000550013 NOTCH4Q99466 2003 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 N4BP3O15049 544 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 LIG1P18858 919 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 FSHRP23945 695 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 MCM7P33993 719 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 TRIM29Q14134 588 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 NAB2Q15742 525 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 FAM187BQ17R55 369 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 TMEM132AQ24JP5 1023 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 EEF1DP3Q658K8 133 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 PIK3R5Q8WYR1 880 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 TUFT1Q9NNX1 390 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 R4GN57 208 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 COL4A3Q01955 1670 aa17.03■□□□□ 0.32
RAB5C-205ENST00000550013 MIA3Q5JRA6 1907 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 CCL16O15467 120 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms