RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ZNF484Q5JVG2 852 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 NCAPG2Q86XI2 1143 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 EFCAB13Q8IY85 973 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 CD101Q93033 1021 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 SMARCAD1Q9H4L7 1026 aa10.78□□□□□ -0.68
RAB5B-206ENST00000549505 AVENQ9NQS1 362 aaPredicted RBP10.78□□□□□ -0.68
RAB5B-206ENST00000549505 HBP1O60381 514 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 TFRCP02786 760 aaKnown RBP10.77□□□□□ -0.69
RAB5B-206ENST00000549505 HOXC6P09630 235 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 CTNNA2P26232 953 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 ARHGAP1Q07960 439 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 STRN3Q13033 797 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 KCTD2Q14681 263 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 BRSK2Q8IWQ3 736 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 MREGQ8N565 214 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 NT5C1BQ96P26 610 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.77□□□□□ -0.69
RAB5B-206ENST00000549505 ANK1P16157 1881 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 RALGAPA2Q2PPJ7 1873 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 MIF4GDA9UHW6 222 aaKnown RBP10.77□□□□□ -0.69
RAB5B-206ENST00000549505 CCDC188H7C350 402 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 TNFAIP3P21580 790 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 PAFAH1B1P43034 410 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 CCNA1P78396 465 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 FMO1Q01740 532 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 LAMC2Q13753 1193 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 PPP2R5EQ16537 467 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 MTERF2Q49AM1 385 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 SEPT14Q6ZU15 432 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 MAEAQ7L5Y9 396 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 WDR49Q8IV35 697 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 C1orf131Q8NDD1 294 aaKnown RBP10.77□□□□□ -0.69
RAB5B-206ENST00000549505 PPTC7Q8NI37 304 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 POMGNT1Q8WZA1 660 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 TAF4BQ92750 862 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 ACO2Q99798 780 aaKnown RBP10.77□□□□□ -0.69
RAB5B-206ENST00000549505 CARD9Q9H257 536 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 UVRAGQ9P2Y5 699 aa10.77□□□□□ -0.69
RAB5B-206ENST00000549505 AGO2Q9UKV8 859 aaKnown RBP10.77□□□□□ -0.69
RAB5B-206ENST00000549505 TOM1L1O75674 476 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 VNN1O95497 513 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 CYP1A1P04798 512 aaPredicted RBP10.76□□□□□ -0.69
RAB5B-206ENST00000549505 UNGP13051 313 aaPredicted RBP10.76□□□□□ -0.69
RAB5B-206ENST00000549505 BPIFB4P59827 614 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 DMTNQ08495 405 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 GRB14Q14449 540 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 RPS6KA1Q15418 735 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 DLK2Q6UY11 383 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 TRIM72Q6ZMU5 477 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 NOP9Q86U38 636 aaKnown RBP10.76□□□□□ -0.69
RAB5B-206ENST00000549505 GLYCTKQ8IVS8 523 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 GPRC5AQ8NFJ5 357 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 VCPIP1Q96JH7 1222 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 KIFC3Q9BVG8 833 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 R3HDMLQ9H3Y0 253 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 LCMT1Q9UIC8 334 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 HNRNPDLO14979 420 aaKnown RBP10.76□□□□□ -0.69
RAB5B-206ENST00000549505 EDN1P05305 212 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 MYBL1P10243 752 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 KYAT1Q16773 422 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 DEPTORQ8TB45 409 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 SLC35G2Q8TBE7 412 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 U2AF1L4Q8WU68 220 aaKnown RBP10.76□□□□□ -0.69
RAB5B-206ENST00000549505 PCDHB18PQ96TA0 734 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 EPC1Q9H2F5 836 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.76□□□□□ -0.69
RAB5B-206ENST00000549505 CPSF3Q9UKF6 684 aaKnown RBP10.76□□□□□ -0.69
RAB5B-206ENST00000549505 GTF3C4Q9UKN8 822 aa10.76□□□□□ -0.69
RAB5B-206ENST00000549505 K7ERI5 159 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 BUB1O43683 1085 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 CYP11B1P15538 503 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 TBXAS1P24557 533 aaPredicted RBP10.75□□□□□ -0.69
RAB5B-206ENST00000549505 LIG4P49917 911 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 GPC5P78333 572 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 PTP4A2Q12974 167 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 TTLL4Q14679 1199 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 TAS1R2Q8TE23 839 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.75□□□□□ -0.698e-8■■■□□ 15.3
RAB5B-206ENST00000549505 MRPL4Q9BYD3 311 aaKnown RBP10.75□□□□□ -0.69
RAB5B-206ENST00000549505 B4GALT4O60513 344 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 CAPN15O75808 1086 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 C22orf31O95567 290 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 STAU1O95793 577 aaKnown RBP10.75□□□□□ -0.69
RAB5B-206ENST00000549505 SOX10P56693 466 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 LY6KQ17RY6 165 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 CLEC16AQ2KHT3 1053 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 TDRD10Q5VZ19 366 aaKnown RBP10.75□□□□□ -0.69
RAB5B-206ENST00000549505 ACAD10Q6JQN1 1059 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 CCDC70Q6NSX1 233 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 EMBQ6PCB8 327 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 TRIM11Q96F44 468 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 SELENOOQ9BVL4 669 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 SLITRK6Q9H5Y7 841 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 AZI2Q9H6S1 392 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 VRTNQ9H8Y1 702 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 ACKR2O00590 384 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 MAGEB2O15479 319 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 NCK2O43639 380 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 GSCP56915 257 aaPredicted RBP10.75□□□□□ -0.69
RAB5B-206ENST00000549505 LAMTOR4Q0VGL1 99 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms