RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 ADAM12O43184 909 aa16.84■□□□□ 0.29
SNX29P1-201ENST00000548357 NEFLP07196 543 aa16.84■□□□□ 0.29
SNX29P1-201ENST00000548357 GRIK3Q13003 919 aa16.84■□□□□ 0.29
SNX29P1-201ENST00000548357 TRIM29Q14134 588 aa16.84■□□□□ 0.29
SNX29P1-201ENST00000548357 NOSTRINQ8IVI9 506 aa16.84■□□□□ 0.29
SNX29P1-201ENST00000548357 PLCD3Q8N3E9 789 aa16.84■□□□□ 0.29
SNX29P1-201ENST00000548357 RIN2Q8WYP3 895 aaPredicted RBP16.84■□□□□ 0.29
SNX29P1-201ENST00000548357 PRRX2Q99811 253 aa16.84■□□□□ 0.29
SNX29P1-201ENST00000548357 POLR3CQ9BUI4 534 aaPredicted RBP16.84■□□□□ 0.29
SNX29P1-201ENST00000548357 DUSP12Q9UNI6 340 aa16.84■□□□□ 0.29
SNX29P1-201ENST00000548357 PATJQ8NI35 1801 aa16.84■□□□□ 0.29
SNX29P1-201ENST00000548357 RECQL4O94761 1208 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 OR52Z1P0C646 297 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 LIG1P18858 919 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 TDGQ13569 410 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 HSP90AA2PQ14568 343 aaPredicted RBP16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 ASTLQ6HA08 431 aaPredicted RBP16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 LILRA6Q6PI73 481 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 PADI6Q6TGC4 694 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 OTOP3Q7RTS5 596 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 C4orf32Q8N8J7 132 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 FLCNQ8NFG4 579 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 SMG7Q92540 1137 aaKnown RBP16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 KIF2CQ99661 725 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 COLEC11Q9BWP8 271 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 WDR6Q9NNW5 1121 aaKnown RBP16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 DMXL1Q9Y485 3027 aa16.83■□□□□ 0.28
SNX29P1-201ENST00000548357 ZMYM2Q9UBW7 1377 aa16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 PAPLNO95428 1278 aa16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 PRKCBP05771 671 aa16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 XRCC6P12956 609 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 FAM187BQ17R55 369 aa16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 NT5DC1Q5TFE4 455 aa16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 ASCL5Q7RTU5 278 aa16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 ACSF2Q96CM8 615 aaPredicted RBP16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 C8orf76Q96K31 380 aa16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 NT5C3AQ9H0P0 336 aa16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 PRMT7Q9NVM4 692 aaPredicted RBP16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 STK39Q9UEW8 545 aa16.82■□□□□ 0.28
SNX29P1-201ENST00000548357 KRBA1A5PL33 1030 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 GFRA3O60609 400 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 CFHP08603 1231 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 CYP11B2P19099 503 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 RPA1P27694 616 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 GBP2P32456 591 aaPredicted RBP16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 NTHL1P78549 312 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 NCBP1Q09161 790 aaKnown RBP16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 TUSC3Q13454 348 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 USP41Q3LFD5 358 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 GLRA4Q5JXX5 417 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 TTC38Q5R3I4 469 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 CD300LGQ6UXG3 332 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 GET4Q7L5D6 327 aaPredicted RBP16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 SIX5Q8N196 739 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 MCPH1Q8NEM0 835 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 PRIMPOLQ96LW4 560 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 NACC1Q96RE7 527 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 CLSTN3Q9BQT9 956 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 FNIP2Q9P278 1114 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 ZNF292O60281 2723 aa16.81■□□□□ 0.28
SNX29P1-201ENST00000548357 ARHGEF35A5YM69 484 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 PP2D1A8MPX8 630 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 N4BP3O15049 544 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 TOB1P50616 345 aaPredicted RBP16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 PRPF4BQ13523 1007 aaKnown RBP16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 ZBTB8OSQ8IWT0 167 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 HACE1Q8IYU2 909 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 TMEM130Q8N3G9 435 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 CEP120Q8N960 986 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 LNX1Q8TBB1 728 aaPredicted RBP16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 MFSD1Q9H3U5 465 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 GOLGA2P5Q9HBQ8 144 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 EPS15L1Q9UBC2 864 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 LIMCH1Q9UPQ0 1083 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 SSX2IPQ9Y2D8 614 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 GDAQ9Y2T3 454 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 GVINP1Q7Z2Y8 2422 aa16.8■□□□□ 0.28
SNX29P1-201ENST00000548357 TADA2AO75478 443 aa16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 IL17AQ16552 155 aa16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 FAM171A1Q5VUB5 890 aa16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 RSPO2Q6UXX9 243 aaPredicted RBP16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 TAS1R3Q7RTX0 852 aa16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 CEP57Q86XR8 500 aa16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 C3orf58Q8NDZ4 430 aa16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 FBXO18Q8NFZ0 1043 aa16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 RPP25Q9BUL9 199 aaKnown RBP16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 RHOBTB2Q9BYZ6 727 aa16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 PRKD2Q9BZL6 878 aa16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 BHMT2Q9H2M3 363 aa16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 FOXP1Q9H334 677 aaPredicted RBP16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 FBXW11Q9UKB1 542 aa16.79■□□□□ 0.28
SNX29P1-201ENST00000548357 SF3B1O75533 1304 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 I3L4J1 428 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 ACKR2O00590 384 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 MEFVO15553 781 aaPredicted RBP16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 NR1I2O75469 434 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 ZMYND10O75800 440 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 AOC1P19801 751 aa16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 CCT6AP40227 531 aaKnown RBP16.78■□□□□ 0.28
SNX29P1-201ENST00000548357 NAMPTP43490 491 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms