RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 TCHPQ9BT92 498 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 NDE1Q9NXR1 346 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 ARMCX1Q9P291 453 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 TBX22Q9Y458 520 aa12.71□□□□□ -0.37
RBFOX1-208ENST00000547372 RGPD8O14715 1765 aaPredicted RBP12.71□□□□□ -0.38
RBFOX1-208ENST00000547372 CNTNAP5Q8WYK1 1306 aa12.71□□□□□ -0.38
RBFOX1-208ENST00000547372 C2orf71A6NGG8 1288 aa12.71□□□□□ -0.38
RBFOX1-208ENST00000547372 CA4P22748 312 aa12.71□□□□□ -0.38
RBFOX1-208ENST00000547372 PSMD7P51665 324 aa12.71□□□□□ -0.38
RBFOX1-208ENST00000547372 C6orf183Q5T699 404 aa12.71□□□□□ -0.38
RBFOX1-208ENST00000547372 SYCE1Q8N0S2 351 aa12.71□□□□□ -0.38
RBFOX1-208ENST00000547372 ZBTB38Q8NAP3 1195 aaPredicted RBP12.71□□□□□ -0.38
RBFOX1-208ENST00000547372 LARP4BQ92615 738 aaKnown RBP12.71□□□□□ -0.38
RBFOX1-208ENST00000547372 SAP30BPQ9UHR5 308 aaKnown RBP12.71□□□□□ -0.38
RBFOX1-208ENST00000547372 COL4A3BPQ9Y5P4 624 aa12.71□□□□□ -0.38
RBFOX1-208ENST00000547372 ASMTLO95671 621 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 HOXD12P35452 270 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 MTTPP55157 894 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 TROAPQ12815 778 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 CMPK2Q5EBM0 449 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 GJB7Q6PEY0 223 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 C14orf80Q86SX3 495 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 SLC35G2Q8TBE7 412 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 RPGRQ92834 1020 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 CCDC77Q9BR77 488 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 TUT1Q9H6E5 874 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 MAGEF1Q9HAY2 307 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 ARL8BQ9NVJ2 186 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 HEY2Q9UBP5 337 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 ASAP1Q9ULH1 1129 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 NAALADL1Q9UQQ1 740 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 HEMK1Q9Y5R4 338 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 LMTK3Q96Q04 1460 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 DYTNA2CJ06 578 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 GSC2O15499 205 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 STAMBPO95630 424 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 RARGP13631 454 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 PIK3CAP42336 1068 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 GALCP54803 685 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 CCDC62Q6P9F0 684 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 ATP11CQ8NB49 1132 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 GRAMD1AQ96CP6 724 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 STK33Q9BYT3 514 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 WDR37Q9Y2I8 494 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 HEY1Q9Y5J3 304 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 GMEB1Q9Y692 573 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 LRP6O75581 1613 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 TMEM221A6NGB7 291 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 POTEMA6NI47 508 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 TRPA1O75762 1119 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 MMEL1Q495T6 779 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 GSTA5Q7RTV2 222 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 GLYCTKQ8IVS8 523 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 RASGEF1CQ8N431 466 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 ECSITQ9BQ95 431 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 BTBD10Q9BSF8 475 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 NACA2Q9H009 215 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 FBXO6Q9NRD1 293 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 CNOT7Q9UIV1 285 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 ANGPTL2Q9UKU9 493 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 RBMX2Q9Y388 322 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 C5P01031 1676 aa12.7□□□□□ -0.38
RBFOX1-208ENST00000547372 TMEM247A6NEH6 219 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 ARHGAP42A6NI28 874 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 SPTLC1O15269 473 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 HAUS5O94927 633 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 LDHAP00338 332 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 STAT1P42224 750 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 MKRN3Q13064 507 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 SEL1L2Q5TEA6 688 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 C6orf163Q5TEZ5 329 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 C1orf146Q5VVC0 180 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 FYB2Q5VWT5 728 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 TMEM53Q6P2H8 277 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 PPP1R21Q6ZMI0 780 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 AZIN2Q96A70 460 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 RUNDC3BQ96NL0 473 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 HAPLN3Q96S86 360 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 SRPK1Q96SB4 655 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 THTPAQ9BU02 230 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 MTUS1Q9ULD2 1270 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 TMA7Q9Y2S6 64 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 RGPD2P0DJD1 1756 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 ABCB11O95342 1321 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 PIAS1O75925 651 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 NR2F2P24468 414 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 YARSP54577 528 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 POU5F1Q01860 360 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 LRRC63Q05C16 580 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 KDSRQ06136 332 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 TREML1Q86YW5 311 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 RAB3IL1Q8TBN0 382 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 TBCKQ8TEA7 893 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 OXCT2Q9BYC2 517 aaPredicted RBP12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 GRIP2Q9C0E4 1043 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 LRRC27Q9C0I9 530 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 GRHL1Q9NZI5 618 aa12.69□□□□□ -0.38
RBFOX1-208ENST00000547372 XRCC5P13010 732 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms