RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 CYP26C1Q6V0L0 522 aa15.86■□□□□ 0.13
COL2A1-209ENST00000546974 FBXL6Q8N531 539 aa15.86■□□□□ 0.13
COL2A1-209ENST00000546974 HDAC7Q8WUI4 952 aa15.86■□□□□ 0.13
COL2A1-209ENST00000546974 GPR62Q9BZJ7 368 aa15.86■□□□□ 0.13
COL2A1-209ENST00000546974 MAN1C1Q9NR34 630 aa15.86■□□□□ 0.13
COL2A1-209ENST00000546974 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.86■□□□□ 0.13
COL2A1-209ENST00000546974 FNIP2Q9P278 1114 aa15.86■□□□□ 0.13
COL2A1-209ENST00000546974 DNM3Q9UQ16 869 aa15.86■□□□□ 0.13
COL2A1-209ENST00000546974 PTGESO14684 152 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 TADA2AO75478 443 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 RECQL4O94761 1208 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 GLUD1P00367 558 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 EDN1P05305 212 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 THP07101 528 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 MTMR3Q13615 1198 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 HSP90AA2PQ14568 343 aaPredicted RBP15.85■□□□□ 0.13
COL2A1-209ENST00000546974 DCAF4L1Q3SXM0 396 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 DTHD1Q6ZMT9 781 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 CCDC149Q6ZUS6 474 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 FEZF2Q8TBJ5 459 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 ACSF2Q96CM8 615 aaPredicted RBP15.85■□□□□ 0.13
COL2A1-209ENST00000546974 PRRX2Q99811 253 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 RHOBTB2Q9BYZ6 727 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 POLD4Q9HCU8 107 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 LIMD1Q9UGP4 676 aa15.85■□□□□ 0.13
COL2A1-209ENST00000546974 KMT2EQ8IZD2 1858 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 MYH11P35749 1972 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 E9PMD0 336 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 LIG1P18858 919 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 NHLH1Q02575 133 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 CREMQ03060 361 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 IL17AQ16552 155 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 RILPL1Q5EBL4 403 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 NT5DC1Q5TFE4 455 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 EEF1DP3Q658K8 133 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 MCTP1Q6DN14 999 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 OTOP3Q7RTS5 596 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 RABGGTAQ92696 567 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 TMX3Q96JJ7 454 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 PAAF1Q9BRP4 392 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 KIFC3Q9BVG8 833 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 PLEKHA4Q9H4M7 779 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 USP20Q9Y2K6 914 aa15.84■□□□□ 0.13
COL2A1-209ENST00000546974 SF3B1O75533 1304 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL2A1-209ENST00000546974 CCDC195A0A1B0GUA6 201 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 CASTOR2A6NHX0 329 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 PP2D1A8MPX8 630 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 K7ERI5 159 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 PAPLNO95428 1278 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 BRD1O95696 1058 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 NAB2Q15742 525 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 ATF7IP2Q5U623 682 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 APBB1IPQ7Z5R6 666 aaPredicted RBP15.83■□□□□ 0.12
COL2A1-209ENST00000546974 KCTD17Q8N5Z5 321 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 RIN2Q8WYP3 895 aaPredicted RBP15.83■□□□□ 0.12
COL2A1-209ENST00000546974 B3GALT6Q96L58 329 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 MMTAG2Q9BU76 263 aaKnown RBP15.83■□□□□ 0.12
COL2A1-209ENST00000546974 TMEM134Q9H6X4 195 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 CACNG4Q9UBN1 327 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 TNFSF13BQ9Y275 285 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 PHLPP2Q6ZVD8 1323 aa15.83■□□□□ 0.12
COL2A1-209ENST00000546974 DOCK8Q8NF50 2099 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 TGM5O43548 720 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 ASGR2P07307 311 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 GJB2P29033 226 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 CDC25AP30304 524 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 NPTX2P47972 431 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 MCM2P49736 904 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 PEX3P56589 373 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 ATP2C1P98194 919 aaPredicted RBP15.82■□□□□ 0.12
COL2A1-209ENST00000546974 IER5LQ5T953 404 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 RINT1Q6NUQ1 792 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 LILRA6Q6PI73 481 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 PALB2Q86YC2 1186 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 DAW1Q8N136 415 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 DRC1Q96MC2 740 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 CXCL16Q9H2A7 254 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 C17orf75Q9HAS0 396 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 UPF2Q9HAU5 1272 aaKnown RBP15.82■□□□□ 0.12
COL2A1-209ENST00000546974 GDAQ9Y2T3 454 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 VWA8A3KMH1 1905 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 CITO14578 2027 aa15.82■□□□□ 0.12
COL2A1-209ENST00000546974 CCDC169A6NNP5 214 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 H3BQV1 296 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 HIP1RO75146 1068 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 RFPL2O75678 378 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 KIF4AO95239 1232 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 CD2BP2O95400 341 aaKnown RBP15.81■□□□□ 0.12
COL2A1-209ENST00000546974 SPATA31D3P0C874 917 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 AVPR2P30518 371 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 ELAVL2Q12926 359 aaKnown RBP15.81■□□□□ 0.12
COL2A1-209ENST00000546974 DMP1Q13316 513 aaPredicted RBP15.81■□□□□ 0.12
COL2A1-209ENST00000546974 RTP2Q5QGT7 225 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 HYIQ5T013 277 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 SPATA31D4Q6ZUB0 917 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 C1orf186Q6ZWK4 172 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 KCNK18Q7Z418 384 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 PRSS33Q8NF86 280 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 HASPINQ8TF76 798 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 STAMQ92783 540 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms