RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 MIS18BP1Q6P0N0 1132 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 RINLQ6ZS11 566 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 ANO5Q75V66 913 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 GPBP1Q86WP2 473 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 TPH2Q8IWU9 490 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 CCDC65Q8IXS2 484 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 DAW1Q8N136 415 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 C1orf127Q8N9H9 656 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 SLC43A3Q8NBI5 491 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 SLC17A8Q8NDX2 589 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 EDARADDQ8WWZ3 215 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 SEPT1Q8WYJ6 367 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 SGSM3Q96HU1 749 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 PCYT2Q99447 389 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 PLIN2Q99541 437 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 GPR20Q99678 358 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 RUSC1Q9BVN2 902 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 BCO2Q9BYV7 579 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 RUBCNLQ9H714 662 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 SAGE1Q9NXZ1 904 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 CPA4Q9UI42 421 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 ABT1Q9ULW3 272 aaKnown RBP9.29□□□□□ -0.92
VPS29-203ENST00000546588 PHF24Q9UPV7 400 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 GDAQ9Y2T3 454 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 Q9Y3F1 56 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 COL4A3BPQ9Y5P4 624 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 PDCD11Q14690 1871 aaKnown RBP9.29□□□□□ -0.92
VPS29-203ENST00000546588 IGKV6-21A0A0C4DH24 114 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 BICDL2A1A5D9 508 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 C2CD2LO14523 706 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 PSMA7O14818 248 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 GAS2O43903 313 aaKnown RBP9.28□□□□□ -0.92
VPS29-203ENST00000546588 KIF20AO95235 890 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 CTGFP29279 349 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 RGS2P41220 211 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 ARHGAP1Q07960 439 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 STIM1Q13586 685 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 ALCAMQ13740 583 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 DEFB115Q30KQ5 88 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 EDRF1Q3B7T1 1238 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 DUSP28Q4G0W2 176 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 HS1BP3Q53T59 392 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 XKR3Q5GH77 459 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 FAM26FQ5R3K3 315 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 TTC39BQ5VTQ0 682 aaPredicted RBP9.28□□□□□ -0.92
VPS29-203ENST00000546588 IQSEC1Q6DN90 963 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 CYP4F22Q6NT55 531 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 DPH6Q7L8W6 267 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 FBXO16Q8IX29 292 aaPredicted RBP9.28□□□□□ -0.92
VPS29-203ENST00000546588 PPTC7Q8NI37 304 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 NPLOC4Q8TAT6 608 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 NOC3LQ8WTT2 800 aaKnown RBP9.28□□□□□ -0.92
VPS29-203ENST00000546588 P2RX5Q93086 422 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 FAM167AQ96KS9 214 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 CAPNS2Q96L46 248 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 NTPCRQ9BSD7 190 aaKnown RBP9.28□□□□□ -0.92
VPS29-203ENST00000546588 KCTD10Q9H3F6 313 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 DHX33Q9H6R0 707 aaKnown RBP9.28□□□□□ -0.92
VPS29-203ENST00000546588 BCAS3Q9H6U6 928 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 PANK4Q9NVE7 773 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 ABI2Q9NYB9 513 aaPredicted RBP9.28□□□□□ -0.92
VPS29-203ENST00000546588 CNTN3Q9P232 1028 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 TRAF3IP3Q9Y228 551 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 NFE2L3Q9Y4A8 694 aa9.28□□□□□ -0.92
VPS29-203ENST00000546588 COL1A2P08123 1366 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 ZMYM2Q9UBW7 1377 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 BECN2A8MW95 431 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 GOLGA6L19H0YKK7 550 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 GGPS1O95749 300 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 ZNF865P0CJ78 1059 aaPredicted RBP9.27□□□□□ -0.93
VPS29-203ENST00000546588 CES1P23141 567 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 ABCD1P33897 745 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 NCKAP1LP55160 1127 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 TPM4P67936 248 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 LACTBP83111 547 aaPredicted RBP9.27□□□□□ -0.93
VPS29-203ENST00000546588 PRKCEQ02156 737 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 ARID5AQ03989 594 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 SPAG1Q07617 926 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 LAMC2Q13753 1193 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 HSDL1Q3SXM5 330 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 LRRC55Q6ZSA7 311 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 SEPT14Q6ZU15 432 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 CYFIP1Q7L576 1253 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 OTUD6AQ7L8S5 288 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 DYMQ7RTS9 669 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 C12orf56Q8IXR9 622 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 SMYD4Q8IYR2 804 aaPredicted RBP9.27□□□□□ -0.93
VPS29-203ENST00000546588 PGBD3Q8N328 593 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 GOLGA6L1Q8N7Z2 621 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 MCPH1Q8NEM0 835 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 ZNF507Q8TCN5 953 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 PIGOQ8TEQ8 1089 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 SCFD1Q8WVM8 642 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 NELFBQ8WX92 580 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 HVCN1Q96D96 273 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 KRTAP4-8Q9BYQ9 185 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 CHRDQ9H2X0 955 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 THAP9Q9H5L6 903 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 PARVGQ9HBI0 331 aa9.27□□□□□ -0.93
VPS29-203ENST00000546588 BRD7Q9NPI1 651 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms