RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TACC1O75410 805 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 MAFO75444 373 aaPredicted RBP12.92□□□□□ -0.34
CCDC38-202ENST00000546386 KRT19P08727 400 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 WEE2P0C1S8 567 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 TGFB3P10600 412 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 TNFAIP3P21580 790 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 CTGFP29279 349 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 CCNA1P78396 465 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 BRDTQ58F21 947 aaPredicted RBP12.92□□□□□ -0.34
CCDC38-202ENST00000546386 KRT39Q6A163 491 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 TRAPPC11Q7Z392 1133 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 SLC9A9Q8IVB4 645 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 PSPC1Q8WXF1 523 aaKnown RBP12.92□□□□□ -0.34
CCDC38-202ENST00000546386 CPA5Q8WXQ8 436 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 TRIM7Q9C029 511 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 ANKZF1Q9H8Y5 726 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 ESYT3A0FGR9 886 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 CTAGE15A4D2H0 777 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 H3BRB1 525 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 CTAGE8P0CG41 777 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 CDK17Q00537 523 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 PPP2R5AQ15172 486 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 TRADDQ15628 312 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 DAAM2Q86T65 1068 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 CTAGE6Q86UF2 777 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 CTAGE4Q8IX94 777 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 ATP8B4Q8TF62 1192 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 NLRP7Q8WX94 980 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 NOX5Q96PH1 765 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 AP1M1Q9BXS5 423 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 NIFKQ9BYG3 293 aaKnown RBP12.91□□□□□ -0.34
CCDC38-202ENST00000546386 TUT1Q9H6E5 874 aaKnown RBP12.91□□□□□ -0.34
CCDC38-202ENST00000546386 SSU72P8A0A1W2PR75 194 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 EFCAB8A8MWE9 144 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 KCNK3O14649 394 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 ADCY3O60266 1144 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 FTLP02792 175 aaPredicted RBP12.91□□□□□ -0.34
CCDC38-202ENST00000546386 PRKCBP05771 671 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 CXCL8P10145 99 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 PIK3CAP42336 1068 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 CAP1Q01518 475 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 ZNF211Q13398 564 aaPredicted RBP12.91□□□□□ -0.34
CCDC38-202ENST00000546386 ACVR2BQ13705 512 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 KCTD17Q8N5Z5 321 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 FBXL13Q8NEE6 735 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 OLIG1Q8TAK6 271 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 SLC35G2Q8TBE7 412 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 SPIRE2Q8WWL2 714 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 OSBPL9Q96SU4 736 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 TINF2Q9BSI4 451 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 APOL6Q9BWW8 343 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 APOBEC3GQ9HC16 384 aaKnown RBP12.91□□□□□ -0.34
CCDC38-202ENST00000546386 COG5Q9UP83 839 aa12.91□□□□□ -0.34
CCDC38-202ENST00000546386 MSCO60682 206 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 DKC1O60832 514 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC38-202ENST00000546386 VNN1O95497 513 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 NAMPTP43490 491 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 RAP1GAPP47736 663 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 VSNL1P62760 191 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 CETN1Q12798 172 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 HIC1Q14526 733 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 OLFML2BQ68BL8 750 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 FOXR2Q6PJQ5 311 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 SAPCD2Q86UD0 394 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 TEX2Q8IWB9 1127 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 GOLGA1Q92805 767 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 NXF1Q9UBU9 619 aaKnown RBP12.9□□□□□ -0.34
CCDC38-202ENST00000546386 HLA-DRAP01903 254 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 TRIM32Q13049 653 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 NAB2Q15742 525 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 CYP4F22Q6NT55 531 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 TMEM270Q6UE05 265 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 PLEKHH3Q7Z736 793 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 CREG2Q8IUH2 290 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 OR6J1Q8NGC5 347 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 HELQQ8TDG4 1101 aa12.9□□□□□ -0.34
CCDC38-202ENST00000546386 ASB14A6NK59 587 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 LCA5LO95447 670 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 CDH8P55286 799 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 MAPK6Q16659 721 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 ZNF568Q3ZCX4 644 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 RSRC2Q7L4I2 434 aaKnown RBP12.89□□□□□ -0.35
CCDC38-202ENST00000546386 TRIM58Q8NG06 486 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 C16orf70Q9BSU1 422 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 SMARCAD1Q9H4L7 1026 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 ERAP1Q9NZ08 941 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 SNX12Q9UMY4 172 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 NUB1Q9Y5A7 615 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 UBE4BO95155 1302 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 PIK3R2O00459 728 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 EXTL3O43909 919 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 MYBL2P10244 700 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 CRHR2Q13324 411 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 GLRA4Q5JXX5 417 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 CCDC181Q5TID7 509 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 KLHL7Q8IXQ5 586 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 ALS2CR12Q96Q35 445 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 PARK7Q99497 189 aaKnown RBP12.89□□□□□ -0.35
CCDC38-202ENST00000546386 AGPAT1Q99943 283 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 LRRC1Q9BTT6 524 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms