RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 HEY1Q9Y5J3 304 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 FLT1P17948 1338 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 APBA3O96018 575 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 PDHBP11177 359 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 AARSP49588 968 aaKnown RBP eCLIP12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 CEP55Q53EZ4 464 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 C16orf86Q6ZW13 317 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 CYFIP1Q7L576 1253 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 TEX9Q8N6V9 391 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 STAMBPL1Q96FJ0 436 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 PPCSQ9HAB8 311 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 HSPBP1Q9NZL4 362 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 MAD2L2Q9UI95 211 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 BAG5Q9UL15 447 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 KPNA7A9QM74 516 aa12.96□□□□□ -0.34
NPC1L1-204ENST00000546276 ASNSP08243 561 aa12.96□□□□□ -0.34
NPC1L1-204ENST00000546276 SCTRP47872 440 aa12.96□□□□□ -0.34
NPC1L1-204ENST00000546276 COPS2P61201 443 aa12.96□□□□□ -0.34
NPC1L1-204ENST00000546276 ITIH4Q14624 930 aa12.96□□□□□ -0.34
NPC1L1-204ENST00000546276 ANO5Q75V66 913 aa12.96□□□□□ -0.34
NPC1L1-204ENST00000546276 RHPN2Q8IUC4 686 aa12.96□□□□□ -0.34
NPC1L1-204ENST00000546276 THNSL1Q8IYQ7 743 aa12.96□□□□□ -0.34
NPC1L1-204ENST00000546276 SLC30A5Q8TAD4 765 aa12.96□□□□□ -0.34
NPC1L1-204ENST00000546276 ZNF341Q9BYN7 854 aa12.96□□□□□ -0.34
NPC1L1-204ENST00000546276 BCS1LQ9Y276 419 aa12.96□□□□□ -0.34
NPC1L1-204ENST00000546276 ROR1Q01973 937 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 MAPK7Q13164 816 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 SEC23AQ15436 765 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 TAF1BQ53T94 588 aaPredicted RBP12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 RSBN1LQ6PCB5 846 aaPredicted RBP12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 ANKMY2Q8IV38 441 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 LRRC43Q8N309 656 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 APOL6Q9BWW8 343 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 SEMA6BQ9H3T3 888 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 ALG13Q9NP73 1137 aaKnown RBP12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 NPHS2Q9NP85 383 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 TECPR2O15040 1411 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 EIF3DO15371 548 aaKnown RBP eCLIP12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 PSMC1P62191 440 aaKnown RBP12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 GPSM2P81274 684 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 TAP1Q03518 808 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 CENPPQ6IPU0 288 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 RCOR2Q8IZ40 523 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 C4orf33Q8N1A6 199 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 CEP70Q8NHQ1 597 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 ACTRT1Q8TDG2 376 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 SLC13A1Q9BZW2 595 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 VPS11Q9H270 941 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 PSMC3IPQ9P2W1 217 aaPredicted RBP12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 ADAMTS13Q76LX8 1427 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 DIP2AQ14689 1571 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 GLI1P08151 1106 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 KCNJ1P48048 391 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 ACAD11Q709F0 780 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 ALKBH8Q96BT7 664 aaKnown RBP12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 RANBP17Q9H2T7 1088 aaKnown RBP12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 LRRC4Q9HBW1 653 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 NEU2Q9Y3R4 380 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 COILP38432 576 aaPredicted RBP12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 GADL1Q6ZQY3 521 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 RFX8Q6ZV50 586 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 SLC26A7Q8TE54 656 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 SERPINB12Q96P63 405 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 KCND2Q9NZV8 630 aa12.95□□□□□ -0.34
NPC1L1-204ENST00000546276 HSPA8P11142 646 aaKnown RBP12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 KRT10P13645 584 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 RPA1P27694 616 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 COPB2P35606 906 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 FBXO33Q7Z6M2 555 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 RIBC1Q8N443 379 aaPredicted RBP12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 TSSK1BQ9BXA7 367 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 UBN1Q9NPG3 1134 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 TRIM33Q9UPN9 1127 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 TTC36A6NLP5 189 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 NVLO15381 856 aaKnown RBP12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 APOEP02649 317 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 ITGA8P53708 1063 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 KCTD2Q14681 263 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 PKN1Q16512 942 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 MEI1Q5TIA1 1274 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 ICA1LQ8NDH6 482 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 DTX3LQ8TDB6 740 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 DNAJC9Q8WXX5 260 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 PACSIN1Q9BY11 444 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 PI4K2BG5E9Z4 385 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 GOLGA8RI6L899 631 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 DNAJC8O75937 253 aaPredicted RBP12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 CNGA1P29973 690 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 GJB7Q6PEY0 223 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 AENQ8WTP8 325 aaKnown RBP12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 CCDC138Q96M89 665 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 MROH2AA6NES4 1674 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 MARK3P27448 753 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 MAGEA4P43358 317 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 FNTAP49354 379 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 PMS1P54277 932 aaKnown RBP12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 FOXR1Q6PIV2 292 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 SLC30A9Q6PML9 568 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 494.4 ms