RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 GANQ9H2C0 597 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 LRRC4BQ9NT99 713 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 CLIC5Q9NZA1 410 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 PDP2Q9P2J9 529 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 DDX25Q9UHL0 483 aaKnown RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 HTR3EA5X5Y0 456 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 E9PMD0 336 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 SPTLC1O15269 473 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 FTCDO95954 541 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 TNNI2P48788 182 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 POLR2FP61218 127 aaKnown RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 PHEXP78562 749 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 DMPKQ09013 629 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 SLC18A3Q16572 532 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 SLC9C1Q4G0N8 1177 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 SNX30Q5VWJ9 437 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 TTBK2Q6IQ55 1244 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 FAM13CQ8NE31 585 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 SCFD1Q8WVM8 642 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 TSG101Q99816 390 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 LSM14BQ9BX40 385 aaKnown RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 RAB34Q9BZG1 259 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 TANGO6Q9C0B7 1094 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 DDX18Q9NVP1 670 aaKnown RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 RTCBQ9Y3I0 505 aaKnown RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 SPO11Q9Y5K1 396 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 COMMD3-BMI1R4GMX3 469 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 PNMA6FA0A0J9YX94 578 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 CCDC160A6NGH7 325 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 TCP11X1B4DZS4 312 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 TRAF5O00463 557 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 ZBTB48P10074 688 aaPredicted RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 SLCO1A2P46721 670 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 ERFP50548 548 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 HPCAP84074 193 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 CACNB1Q02641 598 aaPredicted RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 ZNF543Q08ER8 600 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 GALNTL6Q49A17 601 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 CRY2Q49AN0 593 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 CERKLQ49MI3 558 aaPredicted RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 TDRD12Q587J7 1177 aaKnown RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 FAM26FQ5R3K3 315 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 MFSD14BQ5SR56 506 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 ZNF362Q5T0B9 420 aaPredicted RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 C6orf183Q5T699 404 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 ZNF280DQ6N043 979 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 PPP1R18Q6NYC8 613 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 ZNF449Q6P9G9 518 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 ASRGL1Q7L266 308 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 ATXN2LQ8WWM7 1075 aaKnown RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 AZIN2Q96A70 460 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 CEP63Q96MT8 703 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 SPON1Q9HCB6 807 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 DDX4Q9NQI0 724 aaKnown RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 AIPL1Q9NZN9 384 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 DAGLAQ9Y4D2 1042 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 GRID2IPA4D2P6 1211 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 UFL1O94874 794 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 MYBP10242 640 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 PLCG2P16885 1265 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 TARSP26639 723 aaKnown RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 PSMD7P51665 324 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 IFI35P80217 286 aaPredicted RBP8.41□□□□□ -1.06
UBR1-202ENST00000546274 LIN52Q52LA3 116 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 ARSHQ5FYA8 562 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 SH3D19Q5HYK7 790 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 KSR1Q8IVT5 923 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 ATP8B4Q8TF62 1192 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 CATSPER2Q96P56 530 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 CENPKQ9BS16 269 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 LRRC27Q9C0I9 530 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 POLLQ9UGP5 575 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 HAO1Q9UJM8 370 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 TMEM59LQ9UK28 342 aa8.41□□□□□ -1.06
UBR1-202ENST00000546274 NRXN2Q9P2S2 1712 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 EP400Q96L91 3159 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 E7ENQ6 273 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 RAD21O60216 631 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 EPHB2P29323 1055 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 ECHS1P30084 290 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 VHLP40337 213 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 CCR3P51677 355 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 CASP5P51878 434 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 TTLL12Q14166 644 aaPredicted RBP8.4□□□□□ -1.06
UBR1-202ENST00000546274 PRR5LQ6MZQ0 368 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 TRIM67Q6ZTA4 783 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 NELFCDQ8IXH7 590 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 SDR16C5Q8N3Y7 309 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 DEPTORQ8TB45 409 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 USP33Q8TEY7 942 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 PHF12Q96QT6 1004 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 UIMC1Q96RL1 719 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 MPHOSPH6Q99547 160 aaKnown RBP8.4□□□□□ -1.06
UBR1-202ENST00000546274 DPH5Q9H2P9 285 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 TUT1Q9H6E5 874 aaKnown RBP8.4□□□□□ -1.06
UBR1-202ENST00000546274 STOML1Q9UBI4 398 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 RNF14Q9UBS8 474 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 TMA7Q9Y2S6 64 aaKnown RBP8.4□□□□□ -1.06
UBR1-202ENST00000546274 TSC22D4Q9Y3Q8 395 aa8.4□□□□□ -1.06
UBR1-202ENST00000546274 SLC4A7Q9Y6M7 1214 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms